Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0784 ATGCAGGGTAACACAAGTAGCAACCCATCCAGTATCACAGAAAATTCGTCATTAAAATTTTCTCCTTCATCCTCAATTTCCTATTTTCAGTCTCAGATTTTGTCCTTTGACAACACCACCACACAGTTTTATGGTTTTGACCGTACCTTAAACTCTCCAAAACAAATCTCAACTCAGACCACAAAAGGGTCCTCAAAAAATCAAAACTTTGGAACAAAAACCACACTTGGTAAAAGATCAGCAGCTCGTACTTATGATCACATCATTGCTGAGAGAAAGCGAAGGGAGAAGCTTAGTCAGAGTCTCATTGCTCTTGCAGCCCTAATTCCTGACCTAAAGAAGGTGGACAAGGCTTCTGTACTAGGGAATGCTATTAAGTATATTAAAGAACTTAAAGAACGTGTATCAAATTTGGAAGAAGAAAGCAAGAAGACAAGGGTAGTGGTTCTGAAGGATCCAGAGCTAAATGGAGATAATTATGATTCCTCATCATGTGAAGAGGGGAGCATTGAAAATTCCTGTGGTAGTGAATCACTACTACTCCAAGTTGAAGCAAGAATGTCAGGGCAAGAGGTGCTACTTCGGATCCATTGTCAGAAGAAAAATAATATTCTGGTCAGAATATTGGCACTGTACATGGGCGAAGATTACAGTTTGACCATAGAGGATCTTGTAAAGAACATACACGCTGCTTCATTGAAGTGTATGTCATAA 714 0.3936 MQGNTSSNPSSITENSSLKFSPSSSISYFQSQILSFDNTTTQFYGFDRTLNSPKQISTQTTKGSSKNQNFGTKTTLGKRSAARTYDHIIAERKRREKLSQSLIALAALIPDLKKVDKASVLGNAIKYIKELKERVSNLEEESKKTRVVVLKDPELNGDNYDSSSCEEGSIENSCGSESLLLQVEARMSGQEVLLRIHCQKKNNILVRILALYMGEDYSLTIEDLVKNIHAASLKCMS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0784 237 Coils Coil 121 148 - -
Lal23g0784 237 PANTHER BHLH TRANSCRIPTION FACTOR 11 210 - -
Lal23g0784 237 MobiDBLite consensus disorder prediction 1 20 - -
Lal23g0784 237 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 82 131 IPR011598 GO:0046983
Lal23g0784 237 SMART finulus 88 137 IPR011598 GO:0046983
Lal23g0784 237 Gene3D - 75 147 IPR036638 GO:0046983
Lal23g0784 237 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 11 210 - -
Lal23g0784 237 MobiDBLite consensus disorder prediction 54 78 - -
Lal23g0784 237 Pfam Helix-loop-helix DNA-binding domain 87 132 IPR011598 GO:0046983
Lal23g0784 237 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 83 145 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0784 Lal-Chr23 10364282 10368758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0784 53 210 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.242 1.29e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal23g0784 HLH 3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0784 - - lang:109330753 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0817 15 5980345 5984294 Lal23g0784 23 10364282 10368758 LSH