Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0776 ATGGGAAACGGTGTCTCGAGTCTTTGTTCTTGTCTTGAACCGGCGAACCGGCCGAACCGCGATGAAGATGTTATTTTCTCAGCGGCTGAACCGTTAGATGAAACCCTAGGCCACTCTTTCTGCTACGTTAGATCCTCGAACCGGTTCATATCACCGACTCATTCCGACCGATTCGTTTCTCCCTCTACCTCTCTTCGCTTCTCTCCGGTTCATGAGCCCAAGACTCGAACCGATTCGCATGAAACCGGGTTCAAAGCCATTTCCGGAGCCTCCGTTAGCGCTAACAGCTCCGTTCCTAAAACCGTTATCCAGTTAGAAAACACTAACAACGGAAATAGTAACAATGCCTCGGACGACGTCGTTTCGGATTATGGCGGCGCTGTATTGGTGAATGGTTTTGAAGGAACGTCGTCGTTTAGTGCTCTCCCGCTTCAGCCTGTGCCACGTGGCGGTGAGCCTTATGAGACGAGCGGTTTCTTTCTTTCTGGTCCGATTGAGAGTGGCGCCGGTGCGGATTGCGGCGGAACTACCGGCGTTGTTCCGTTTTCGGCTCCGTTGGGAGGGTTTTACGTGAAGAAGAAGAGGAGGAACGGGATTTCGTCGTTCCGGAAGGCTTTTCACCGGAACAACTCGTCGGAGAAGAAGCGACCGTGGGTGGTGCCGGTGTTGAACTTCGTTGGAAGAAAGGAAGTTCCGGTGAACGAGTTGAAGGAGGCGAAATCGGTGATGGAGGCAAAGAATGAGAGCAATGTGCAGTGGGCTCTTGGAAAAGCCGGCGAGGATCGTGTTCACGTGGTAGTTTCAGAGGAACAAGGGTGGTTGTTCGTTGGAATTTATGATGGTTTCAACGGCCCCGATGCACCGGAGTTTCTGATGGGTAACCTTTACCGTGCAGTTCACAATGAGCTTCAGGGTTTGTTTTGGGAAATTGAAGAATCAGAGGAGAGTAACAACCCTATGAATTTGAGTGTTGCTGCTGAAAGTTCAGTGATTCACGAGATTAAGAACAATGAGAGTGTTGTATCTGAAATTGATGTTGAAGAAGACTCGATTTCACGATCCGTGAAGAGGGTTACATTCCAAGCTGAGGGAACTGAGAGTAGAAGGCGTAGGCTGTGGGAATTTCTTGCTGAGGACCCTGAAGATGGACTTGATCTTTCGGGTTCTGATAGGTTTGCATTTTCGGTTGATGATGCTCTTAGTGTTAACAATGGCAATGCAGGGTCAGCGGTTAGCAGAAGGTGGCTTTTGTTGTCGAAGTTGAAGCATGGATTGTCAAAGCATAAAGAGGGTCATAGTAGTAGGAAGTTGTTTGGGACTGAGGAGCAAGAGAAGGTTGAGGTGGAAAATCAAAATCGGGTAGAAGAGAAGCCTTCTGGTGGCAGCAGTGGTGGTAGTGGGAGGAAGAGGAAGGTCGGTCCTGTCGATCATGATTTGGTTTTAAGGGCAATGTCTAGGGCACTTGAAGTGACTGAGCTTGCATATTTGGATATGACGGATAGACTTCTCGCTTCTAATCCTGAACTTGCTTTGATGGGTTCATGTTTGTTAGTTGTGTTAATGAGGGATGAGGATGTGTATGTAATGAATGTTGGGGATAGCAGAGCGATTGTGGCACACTATGAGCCAAAGGACATTGGTTCTAATGTTCAATCGGGAAGTAAGGGAGCTCGGGGGTCGAGCACAGAGAGTATAGTTGAGGAGTCTTTAGGTGTAGGTGAAGGTGAAAGTGCTAGAAATTTGGGGAGTGAGGGTCCTGCTCAAGAAATGAGGTTGGCTGCATCACAGCTGTCCACTGATCACAGCACTAGCATTGAGGAAGAAATCATTAGAATTAAGAATGAACATCCTGATGATAACCATTGTATAGTCAATGATAGAGTAAAAGGCCGTCTTAAGGTCACCAGAGCATTTGGCGCAGGATTTTTGAAGCAGCCGAAGTTGAATGATGCTGTTCTAGAAATGTTCCGTAATGAATATATTGGCACCATGCCATATATATCCTGCTGTCCTTCACTACGCCACCATAGATTATGCCCGACAGATCAGTTCTTGATCCTATCGTCTGATGGGTTATATCAATATCTAGACAATGAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCAGAAGGAGATCCTGCCCAACATTTAATAGAAGAGCTGCTGCTCCGTGCAGCCAAGAAGGCAGGAATGGATTTTCATGAGTTGCTGGATATCCCTCAAGGAGATCGGAGGAAGTACCATGATGATGTAACTGTTATGGTCATATCACTTGAAGGAAGAATCTGGAAATCTTCAGGGAAGTATCTGTGA 2325 0.4705 MGNGVSSLCSCLEPANRPNRDEDVIFSAAEPLDETLGHSFCYVRSSNRFISPTHSDRFVSPSTSLRFSPVHEPKTRTDSHETGFKAISGASVSANSSVPKTVIQLENTNNGNSNNASDDVVSDYGGAVLVNGFEGTSSFSALPLQPVPRGGEPYETSGFFLSGPIESGAGADCGGTTGVVPFSAPLGGFYVKKKRRNGISSFRKAFHRNNSSEKKRPWVVPVLNFVGRKEVPVNELKEAKSVMEAKNESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRAVHNELQGLFWEIEESEESNNPMNLSVAAESSVIHEIKNNESVVSEIDVEEDSISRSVKRVTFQAEGTESRRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVNNGNAGSAVSRRWLLLSKLKHGLSKHKEGHSSRKLFGTEEQEKVEVENQNRVEEKPSGGSSGGSGRKRKVGPVDHDLVLRAMSRALEVTELAYLDMTDRLLASNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYEPKDIGSNVQSGSKGARGSSTESIVEESLGVGEGESARNLGSEGPAQEMRLAASQLSTDHSTSIEEEIIRIKNEHPDDNHCIVNDRVKGRLKVTRAFGAGFLKQPKLNDAVLEMFRNEYIGTMPYISCCPSLRHHRLCPTDQFLILSSDGLYQYLDNEEVVSQVESFMEKFPEGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0776 774 MobiDBLite consensus disorder prediction 546 584 - -
Lal23g0776 774 SUPERFAMILY PP2C-like 256 763 IPR036457 -
Lal23g0776 774 SMART PP2C_4 244 760 IPR001932 -
Lal23g0776 774 Gene3D - 227 371 IPR036457 -
Lal23g0776 774 PANTHER PROTEIN PHOSPHATASE 2C 29 17 772 - -
Lal23g0776 774 Gene3D - 385 768 IPR036457 -
Lal23g0776 774 PANTHER PROTEIN PHOSPHATASE 2C 17 772 IPR015655 GO:0004722|GO:0006470
Lal23g0776 774 MobiDBLite consensus disorder prediction 61 80 - -
Lal23g0776 774 MobiDBLite consensus disorder prediction 427 473 - -
Lal23g0776 774 ProSiteProfiles PPM-type phosphatase domain profile. 239 762 IPR001932 -
Lal23g0776 774 MobiDBLite consensus disorder prediction 547 567 - -
Lal23g0776 774 MobiDBLite consensus disorder prediction 431 454 - -
Lal23g0776 774 Pfam Protein phosphatase 2C 595 730 IPR001932 -
Lal23g0776 774 CDD PP2Cc 476 762 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0776 Lal-Chr23 10285043 10290845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0776 1 774 PP2C-type Phosphatase Gene Family AT2G35350 57.895 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0776 - - mtr:MTR_4g098650 1035.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0776 23 10285043 10290845 Lal23g0776 23 10285043 10290845 ECH
Lal16g0851 16 5530551 5539036 Lal23g0776 23 10285043 10290845 PCT
Lal23g0776 23 10285043 10290845 Lal16g0851 16 5530551 5539036 PCT