Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0765 ATGGCTCTTTCTCTTTTCTGTCTTCTCCTAACCTTGCTTTTCATCCAAACTATGGCAGATACTTCATGTACTGATTGCTTTGTTCAATCTAGGGCAGCTTATTACCCAAATTCTGAAGTAAATGGCACAGAAGTTGGAGCATGTGGCTTTGGCTCTTTTGGTGCTACCATTAATGGCGGGGATGTATCAGCTGCATCGGATCTTTATCGAAATGGTGTTGGCTGTGGCGCCTGTTATCAAGTTAGGTGTACCAACAGTACCTATTGCTCAAGCAATGGTGTGACTGTAGTGATAACTGACCAAGGCTCAGGGGATAACACTGATTTCATTCTTAGCAAAAGAGCCTTTGGTGGAATGGCTCAGACCCCAGACAAAGCTACTTCCCTATTAGCTCTTGGTGTAACTGATATTGAATACAAACGCTACCCAAACAAAAACATAACAGTTAAGATAGATGAGAGTAGCAGCAACCCTCATTTCTTGGCTTTTGTCATATGGTTTCAACAAGGAAAGAGAGACATAACAGCTGTGCAGCTCTGTGAGACTGAGAACTTTATGTGCAAGTTATTGGACAGGAGCCATGGGGCAATTTGGACTAGTAGCTCTCCACCTAATGGAGCTCTATCTTTAAGGATGCTGTTTAGTGATGAAGAAGGGGAAGAAACATGGGTTGTTCCTGTTAATAACATACCTCAAAACTGGATGGCTGGACAAACCTACGATTCTGGGGTACAAGTGGACCAGTAG 747 0.4311 MALSLFCLLLTLLFIQTMADTSCTDCFVQSRAAYYPNSEVNGTEVGACGFGSFGATINGGDVSAASDLYRNGVGCGACYQVRCTNSTYCSSNGVTVVITDQGSGDNTDFILSKRAFGGMAQTPDKATSLLALGVTDIEYKRYPNKNITVKIDESSSNPHFLAFVIWFQQGKRDITAVQLCETENFMCKLLDRSHGAIWTSSSPPNGALSLRMLFSDEEGEETWVVPVNNIPQNWMAGQTYDSGVQVDQ 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0765 248 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 143 IPR007112 -
Lal23g0765 248 PANTHER EXPANSIN-LIKE B1 5 246 - -
Lal23g0765 248 SUPERFAMILY PHL pollen allergen 145 242 IPR036749 -
Lal23g0765 248 Gene3D - 143 246 IPR036749 -
Lal23g0765 248 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 159 242 IPR007117 -
Lal23g0765 248 PANTHER EXPANSIN-B3 5 246 - -
Lal23g0765 248 Gene3D - 15 142 IPR036908 -
Lal23g0765 248 Pfam Lytic transglycolase 66 139 IPR009009 -
Lal23g0765 248 Pfam Expansin C-terminal domain 147 225 IPR007117 -
Lal23g0765 248 SUPERFAMILY Barwin-like endoglucanases 17 144 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0765 Lal-Chr23 10222770 10224493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0765 9 244 Expansin Gene Family AT4G17030 42.623 1.28e-60 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0765 - - ccaj:109799868 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1261 23 13720162 13722515 Lal23g0765 23 10222770 10224493 PCT
Lal23g0765 23 10222770 10224493 Lal23g1261 23 13720162 13722515 PCT