Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0763 ATGGCTGTTCAAGCTCAATATCCATCCAATGCCCTTTTTCTAAACAGAAATGGTGAAGAAGGAACTGATTACTCATTACAACAACCACAATCAAAAGGAGGAATCCTAAATCAATCTCATAATCTATACAACAACATGGGAAATATGAATGGTGATAATAATTCTAATTCTGTGAAGAGAGGAAGAGAAGCTATTGTAGCTAACACAACCCCTAATAATATTATGAACCCATTGTTCTCTATGCAATCACACCCTCCACAACTTATTCATCTTTCTCAACTACATAATCAACAACAAAATGTGGTCTCTTCAGGCATTGGCTTATCCTTTGATCAACAACAACAAAGATTACAACTTCAACAACAACCTCAACAACAACAACAACAACAACTACATGGATGTTACTCATCCTCGTACTTATCTTTATTGTCAGAAGGGTTTTCTTCACAGATGAAACGACAAAGAGATGAAATTGATCAATTCCTTCATGCCCAGGGAGATGAGTTACAGCGTACATTGAAGGAGAAGAGGCAGAAGCATGACCGGGATCTGTCACGCGCGGCAGCGGAGGTGGTGGCGCGTCTTTTGAGAGAAAAAGAAGCGGAGATGGAGAAAGCCACGCGCCAAAACGCTGAGTTAGAGGCACATGCCGCCCAGTTGAGCGCGGAGGCGCAGGTGTGGCAGGCCAAGGCGAGGGCACAAGAGGCAGCGGCGGCATCTTTACATGCCCAGTTGCAGCAGACTATGATGGCACTCGGAGCCGGCGGGTGTCGCGGCGGCGATGATGGCGGAGCAGGGCTGTCATGCGCCATGGATGAGGGCCAGGCGGAAGATACTGAGTCGGCTTATATTGACCCAGACAGGGTGGAAGTCGTTTCACCAGTGGTGGTAGCGCGTGCAAAATGTCGGGGATGTGGGAAGCGCGTGGCATCGGTGGTGGTGTTGCCGTGTCGGCACTTGTGCATGTGTGCAGAATGTGATGCGCATTTTAAAGCGTGTCCAGTTTGCCTTATTCTAAAACATTCAACCATTGAAGTGCTTATCTCTTAA 1050 0.4695 MAVQAQYPSNALFLNRNGEEGTDYSLQQPQSKGGILNQSHNLYNNMGNMNGDNNSNSVKRGREAIVANTTPNNIMNPLFSMQSHPPQLIHLSQLHNQQQNVVSSGIGLSFDQQQQRLQLQQQPQQQQQQQLHGCYSSSYLSLLSEGFSSQMKRQRDEIDQFLHAQGDELQRTLKEKRQKHDRDLSRAAAEVVARLLREKEAEMEKATRQNAELEAHAAQLSAEAQVWQAKARAQEAAAASLHAQLQQTMMALGAGGCRGGDDGGAGLSCAMDEGQAEDTESAYIDPDRVEVVSPVVVARAKCRGCGKRVASVVVLPCRHLCMCAECDAHFKACPVCLILKHSTIEVLIS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0763 349 Pfam Zinc finger, C3HC4 type (RING finger) 300 336 - -
Lal23g0763 349 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 348 IPR013083 -
Lal23g0763 349 PIRSF SBP1_RNase_bind 1 349 IPR017066 -
Lal23g0763 349 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 348 IPR017066 -
Lal23g0763 349 ProSiteProfiles Zinc finger RING-type profile. 302 336 IPR001841 -
Lal23g0763 349 Coils Coil 189 230 - -
Lal23g0763 349 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 1 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0763 Lal-Chr23 10196134 10198465 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0763 K19042 - gmx:100788924 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0840 15 6285952 6288421 Lal23g0763 23 10196134 10198465 LSH
Lal16g0863 16 5661378 5663826 Lal23g0763 23 10196134 10198465 PCT
Lal15g0840 15 6285952 6288421 Lal23g0763 23 10196134 10198465 PCT
Lal23g1257 23 13690901 13692975 Lal23g0763 23 10196134 10198465 PCT
Lal23g0763 23 10196134 10198465 Lal16g0863 16 5661378 5663826 PCT
Lal23g0763 23 10196134 10198465 Lal15g0840 15 6285952 6288421 PCT
Lal23g0763 23 10196134 10198465 Lal23g1257 23 13690901 13692975 PCT