Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0747 ATGGTTGCATCATTAAGTAATGGTCATTCCGAGGAAAAATTTGGGAAGCCACTGATGGAAAATGGGGATTGCACTTTTCTTGTTCTGCCTAAATATAAGCGGCGAAGAGTTTCAGTAATTCGTGATTTCCCAGAAGGATGTGGCTTGTTTGGTTCAAAGATCCATCCTCAAACCATTTTCCAAACATTCGACCTTAGTTTGACGAAGGAAGATCCGGTGGTCTCATCTCATATGCATGGACCACCTCCTTTGGCAAACGATGAGCCTTCTAATGAGCAGTTGGTGGGCATGGAAGCAGCTTTGGAAGATACAGAGTTGACAAGAACTCCAAAAGCAGTAAAATCTGGTTCCATCAGTATGTCGAATTTGCCTCCTACAGTGAACGAGGTGGCGTTTGTAGGTGTTTCAAAATTCTTATCATCTGATTGCAATATGTCTTGTTCCAGTTCTTGTTTGAAGAACGCTGTAACTGCAAGGTCTTTTCCTCGAAGAAAAGTTTCAGCTGTCAGGGGCTTCCCTCCGTTGTGTGGAAAAAATGCTTCACATCTCAGGTTTGACAGTGAATGTCTAAATGAGATCTCTTCTTTGGGGAACAAGAGTAATGGTCTACAGAACATGTTTGTAGATGACAAGCCATTGGAAAAGGTAACAGCAACTGATGCGAAGGAAGTAATGGGCATAGTTCGAGCTGAAAATCAAGGGGATGATGCTACTACGAATGTGAAGACACTTGATGTCTTTGAGTCTTCTTCTACGATGCAATTGGCACCGGAAAGCGTAAGAGAAAGGTGCATTACGATTTTTGAAGAAAGCAGTCATCACCAGGTTGAACTAAATTCGAAGGCAGAAGATATAGATGGAAATGGAGATGCTGTTCAGTTTGAGGGAAGATCAGGGAATGAGATTTTAGTTCTCCCTGAATTCCAAAGTCATGAGACGGAGCCTTCAGAAATGCCTAATTGTCGGCATGAGCCAAAAGGAGGTTTTGATGGATTGCAGGTTGTATCTATCAAGACAGTAGTGCTGGGCTTGATGGCTGAATCTAAATGTCCTTGGAGACATGGTAAAGATTCCTCCAAATTTGATTTGATTGATGGTACAAATCTAAGCAAGCGAAAGAAAGTTGGTATTTTTGCACAGCATGACATGTCAAAAGCTGATAAGAGAGAAGAGTCACCAAATCATGTTGGGAAGAAGCCTTCACAAAAGAAAAAGCAAAATGCTGCTTCTGAAGGTTCAGGTCAATTGGTAATTTGGGAAAATAACGATTCTCATAACTGTAATGAAAATATTGGAGAATTCCGGGTCAACGAGAAATCAAATGGTTCAAGTGTACAAGTTCCTCCTATTAGTCATCATAACAATGACTCAAATGTGACCCGCAATAAAGTGAGGGAAACATTGCGCTATTTCCATGCTGTTTATAGAAAGCTTTTGCATGAAGATGAATCAAAGATAAAAATGCAAACAGATGGTCCGAGAATTTTCCATACACGTGCAGCTAAGATCCTTAAGGAGCAAGGGAAATATATTAACACAGGCAAACAGATATTGGGATCTGTCCCTGGAGTTGAAGTTGGTGATGAATTTCAGTTTAGGTTGGAGCTTAATATTGTTGGCCTTCATCGGCAGGTTCAAGGTGGCATAGATTATGTGGATCACAATGGTAAGATCCTTGCCACAAGTGTTGTTGCGACGGGGGGCCATGCTGACGAGTTAGATAATCCTGATGTCTTGATATATACAGGACAGGGTGGCAATTTGGTGAACTCTGATAAAGAACCCGAAGATCAGAAGCTTAAGCGAGGCAATCTTGCTTTAAAGAACAGCAGTGAGGAAAAGAATCCTGTCAGGGTGATTCGTGGCTCTGAATCAACAGATGGAAAGCTAAGGAGATATGTTTATGATGGGCATTATATAGTCGACAGATATTGGCAAGATATGGGACCACATGGTAAGCTGATTTTTAGGTTTCTGCTGCAAAGAATCCCAGGTCAGCCAGTGCTTGCGTGGAAGGAAGTGGAAAAATCTAAAAAAATGAAGTTAGGAGAGGGTCTACGTGTTAATGATATTTCTCATGGGAAAGAGCGAATTCCGATATGTGCTGTGAACACCATAGATAATGAAAAGCCCCCTCCATTTAAATACACAACTAGCATGATATATCCTAATTGGTGCAACCCTATTCCTCCGGAAGGATGTGACTGTATTGACGGATGCTCCGACTCAGAGAAATGTTTTTGTGCAGTGAAAAATGGGGGAGAGATACCATTCAATCACAATGGAGCTATTGTAGAAGCAAAGTCTTTAGTCTATGAGTGTGGACCTTCTTGCAAGTGCACTTCATGCTACAATAGAGTCAGCCAACTAGGCATAAAGCTTCAGCTTGAAATTTTTAAAACCAAGACAAGAGGGTGGGGAGTGAGATCTATAAACTTCATCTCTTCAGGAACTTTTATTTGTGAATACACAGGAGAGCTTCTTGAAGAGAAAGATGCTGAACAAAGAACTGGCACTGATGAGTATCTTTTTGATATTGGGAATAACTACAACAATTATACTTCTTTGGATGGGCCTTTGAATGTTATACAGGATACACAGTCAACTTCTTGCAAAGTTGTGGAGGGAAACAGCTTCACCATTGATGCAGCCGAGTATGGTAATCTGGGGAGATTCATCAACCATAGTTGCTCTCCTAATCTATATGCTCAAAATGTCCTTCACGATCACGATGACGAGAGGATTCCTCACATAATGCTCTTTGCTGCTGACAACATTCCTCCCTTTCAAGAGCTAACCTATGATTACAATTACAAGATAGATCAAGTTTTTGATTCTAATGGAAAAATAAAAAGGAAAAATTGCTACTGTGGTTCTGTGGAGTGCACTGGTAGGATGTATTGA 2904 0.4091 MVASLSNGHSEEKFGKPLMENGDCTFLVLPKYKRRRVSVIRDFPEGCGLFGSKIHPQTIFQTFDLSLTKEDPVVSSHMHGPPPLANDEPSNEQLVGMEAALEDTELTRTPKAVKSGSISMSNLPPTVNEVAFVGVSKFLSSDCNMSCSSSCLKNAVTARSFPRRKVSAVRGFPPLCGKNASHLRFDSECLNEISSLGNKSNGLQNMFVDDKPLEKVTATDAKEVMGIVRAENQGDDATTNVKTLDVFESSSTMQLAPESVRERCITIFEESSHHQVELNSKAEDIDGNGDAVQFEGRSGNEILVLPEFQSHETEPSEMPNCRHEPKGGFDGLQVVSIKTVVLGLMAESKCPWRHGKDSSKFDLIDGTNLSKRKKVGIFAQHDMSKADKREESPNHVGKKPSQKKKQNAASEGSGQLVIWENNDSHNCNENIGEFRVNEKSNGSSVQVPPISHHNNDSNVTRNKVRETLRYFHAVYRKLLHEDESKIKMQTDGPRIFHTRAAKILKEQGKYINTGKQILGSVPGVEVGDEFQFRLELNIVGLHRQVQGGIDYVDHNGKILATSVVATGGHADELDNPDVLIYTGQGGNLVNSDKEPEDQKLKRGNLALKNSSEEKNPVRVIRGSESTDGKLRRYVYDGHYIVDRYWQDMGPHGKLIFRFLLQRIPGQPVLAWKEVEKSKKMKLGEGLRVNDISHGKERIPICAVNTIDNEKPPPFKYTTSMIYPNWCNPIPPEGCDCIDGCSDSEKCFCAVKNGGEIPFNHNGAIVEAKSLVYECGPSCKCTSCYNRVSQLGIKLQLEIFKTKTRGWGVRSINFISSGTFICEYTGELLEEKDAEQRTGTDEYLFDIGNNYNNYTSLDGPLNVIQDTQSTSCKVVEGNSFTIDAAEYGNLGRFINHSCSPNLYAQNVLHDHDDERIPHIMLFAADNIPPFQELTYDYNYKIDQVFDSNGKIKRKNCYCGSVECTGRMY 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0747 967 Pfam SAD/SRA domain 518 666 IPR003105 -
Lal23g0747 967 ProSiteProfiles Pre-SET domain profile. 732 791 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal23g0747 967 Pfam Pre-SET motif 691 786 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal23g0747 967 ProSiteProfiles YDG domain profile. 519 662 IPR003105 -
Lal23g0747 967 ProSiteProfiles Post-SET domain profile. 951 967 IPR003616 -
Lal23g0747 967 SMART PostSET_3 951 967 IPR003616 -
Lal23g0747 967 SMART G9a_1 514 666 IPR003105 -
Lal23g0747 967 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 407 966 - -
Lal23g0747 967 Gene3D SET domain 685 967 IPR046341 -
Lal23g0747 967 MobiDBLite consensus disorder prediction 375 412 - -
Lal23g0747 967 SUPERFAMILY SET domain 681 944 IPR046341 -
Lal23g0747 967 Pfam SET domain 805 937 IPR001214 GO:0005515
Lal23g0747 967 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 97 967 IPR025794 GO:0016571
Lal23g0747 967 Gene3D - 501 684 IPR036987 -
Lal23g0747 967 SUPERFAMILY PUA domain-like 500 675 IPR015947 -
Lal23g0747 967 MobiDBLite consensus disorder prediction 375 398 - -
Lal23g0747 967 SMART set_7 794 943 IPR001214 GO:0005515
Lal23g0747 967 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 407 966 - -
Lal23g0747 967 SMART preset_2 688 779 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal23g0747 967 ProSiteProfiles SET domain profile. 794 937 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0747 Lal-Chr23 10067159 10070062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0747 458 964 Su(var)3-9 homologs AT5G04940 38.050 5.00e-109 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal23g0747 SAD_SRA 1.4e-46 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0747 K11420 - lang:109331825 1321.99