Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0737 ATGACCCGACGATGTTCCCATTGCAGCCACAATGGGCACAACTCAAGAACATGTCCTAACCGAGGGGTGAAGCTATTTGGAGTTCGATTAACTGATGGGTCGATTCGTAAGAGTGCTAGCATGGGAAATCTTAATCATTATGCTTCTTCTGGTGGACCCCTCATTGGTGCTGAAACCACTGATCATGGTGTTGATGGTTATGCTTCTGAGGATTTTGTTACTGGGTCATCTTCTAATTCTCGTGAAAGGAAAAAAGGAGTTCCGTGGACTGAGGAAGAACATAGAATGTTCTTACTTGGATTGCAGAAGCTGGGAAAAGGCGATTGGCGCGGAATTGCAAGGAACTATGTTATATCTAGGACACCAACTCAAGTGGCCAGTCATGCTCAGAAATATTTCATCAGGCAAAGCAATTTATCTAGGCGGAAAAGGCGTTCCAGCTTGTTTGATATTGTTGCAGATGAAGCAGCTGAAGCTCCAATGGTAGAGCAAGACTTCTTGTCTGCTAATCAGTTCGAAGCTGAAACAGAAGGCAACAATCCCTTGCCTGCTCCTCCTACACTCGATGAAGAATGCGAATCCATGGATTCCACTAATTCGAATGAAGGCGAGCCTGCATGCCCTGCACCGTTAAAGCCTGATAATAACTCACAATCATCTTATCCACTAATATATCCTTCATATTACCCTCCTTTCTTCCCATTTCCTCTGCCGTATTGGTCAGAATACAGTCCCGCCGAGCCCGTGAAGAAGGAGGAGATGCACGAAGTGCTGAAGCCAACTGCAGTACATTCTAAAAGTCCAATCAATGTTGATGAACTTGTTGGCATGTCCAAACTGAGTTTAGGAGAGACTATTGGTGACTCTGGCCCCTCTATTTTGAAACAAAAACTTCAACAAGAAGGACCCTCTAGGCAATCAGCTTTTCATGCAACTCCAGCGACAACCGCGTGTGGTAGATCGAGTGTGAATGGCAGTGTCATCCATGCAGTTTAA 996 0.4508 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLNHYASSGGPLIGAETTDHGVDGYASEDFVTGSSSNSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNLSRRKRRSSLFDIVADEAAEAPMVEQDFLSANQFEAETEGNNPLPAPPTLDEECESMDSTNSNEGEPACPAPLKPDNNSQSSYPLIYPSYYPPFFPFPLPYWSEYSPAEPVKKEEMHEVLKPTAVHSKSPINVDELVGMSKLSLGETIGDSGPSILKQKLQQEGPSRQSAFHATPATTACGRSSVNGSVIHAV 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0737 331 PANTHER TRANSCRIPTION FACTOR KUA1 1 324 - -
Lal23g0737 331 CDD SANT 88 133 IPR001005 -
Lal23g0737 331 SUPERFAMILY Homeodomain-like 83 138 IPR009057 -
Lal23g0737 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 137 IPR017930 -
Lal23g0737 331 MobiDBLite consensus disorder prediction 174 216 - -
Lal23g0737 331 SMART sant 85 135 IPR001005 -
Lal23g0737 331 ProSiteProfiles SANT domain profile. 89 137 IPR017884 -
Lal23g0737 331 ProSiteProfiles Myb-like domain profile. 81 133 IPR001005 -
Lal23g0737 331 Gene3D - 87 139 - -
Lal23g0737 331 PANTHER BNAC01G21010D PROTEIN 1 324 - -
Lal23g0737 331 Pfam Myb-like DNA-binding domain 88 133 IPR001005 -
Lal23g0737 331 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 84 136 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0737 Lal-Chr23 9962693 9965716 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal23g0737 Myb_DNA-binding 1.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0737 - - ccaj:109807943 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0874 15 6569926 6573866 Lal23g0737 23 9962693 9965716 LSH