Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0727 ATGGAAGGTGGAATGGTAGAAGATGTATCATTTATAGGAGGGTTAATAGGGGTGCAATTTGTATATGCTGGAAATGCTGTGTTGTTGAGTTATCTTATGTCTTTGGGTCTTAACTCTCTTACCATTGTTATTTTCTCTTCCCTTGCTACATTCCTTATTCTTCTCCCTGTTGCTTTTTATTATGAAAGAAGTGTATGGCCTAAGAAATTCAGTTTCAAGTTGTTCATACAGATACTCTTGCTTTCATTTGGAGGGGTAACCTTGTTTCAGTCTTTATTCCTTAAAGGAATCAATCTAACCTCACCTTCAATGGGAACTGCCATGCCAAACCTTGCCCCTGGTCTTATCTTTGTCATTGCATGGACTTTTAGGTTGGAAAATGTGGACTTAAGGTGCACATATAGTAAAATAAAAATTACTGGCACATTGCTTTGTGTCTTGGGGGCTCTCACAATGAGTATAATGTCAAGCCTTTCAATTTCTGCACCAAATAAAGAAGCAACAGTTCAACTATTAACATCTCCACCACCAGATGTTTTGTTAGACAGACAGAAGATAATTGGTTGCCTCTATCTCTTGGCCGCGGTTTTCATGTTGTCTAGCAACATTGTCCTGCAGGCTTTTACTCTAGCCGATTTTCCTGCGCCAGTGTCGTTATGCGCAATAACATCCCTTTTCGGCGCTTTCATGACTGCAGCAGCTCAACTAATTCAAGATCATGAATTCAAAACTAGTTGGCCACTTGTCAGTGTTAAAGACCTCATTGCCTATTCTCTTCTGGCAGGCACTGTGAATGGAATATGCCTAAGCTTCAATGGTTGGGCACTTAAAAAGAGAGGACCAGTCTTGGTATCCATGTTCAGCCCTATTGGCACAGTTTGCTCTGTCATTTTCTCATATGTTACCTTTGGTGACACAATTAATATTGGAAGCTTTGGGGGTATGATCCTTATGTTTACTGGTCTCTACTTTGTACTGTGGGCCAAAGGGAAAGAAGGGTATGCAAATGGAGATGGCTTAGACAGTGAGTTTGATGCAGAGAAACCTCTCTTAGGTAAGGTTCACGGATCATTGGCGCGTGCTGGAAAAGTGAGAGGTCAAACTCCTAAAGTTGCTAAGCAAGACAAGAAGAAGAAGCCACGTGGACGCGCTCACAAGCGCATGCAATACAATCGCCGATTCGTCACCGCTGTGGTGGGATTTGGAAAGAAGCGTGGACCAAACTCATCTGAGAAGTGA 1239 0.4205 MEGGMVEDVSFIGGLIGVQFVYAGNAVLLSYLMSLGLNSLTIVIFSSLATFLILLPVAFYYERSVWPKKFSFKLFIQILLLSFGGVTLFQSLFLKGINLTSPSMGTAMPNLAPGLIFVIAWTFRLENVDLRCTYSKIKITGTLLCVLGALTMSIMSSLSISAPNKEATVQLLTSPPPDVLLDRQKIIGCLYLLAAVFMLSSNIVLQAFTLADFPAPVSLCAITSLFGAFMTAAAQLIQDHEFKTSWPLVSVKDLIAYSLLAGTVNGICLSFNGWALKKRGPVLVSMFSPIGTVCSVIFSYVTFGDTINIGSFGGMILMFTGLYFVLWAKGKEGYANGDGLDSEFDAEKPLLGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0727 412 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 330 - -
Lal23g0727 412 Pfam Ribosomal protein S30 353 409 IPR006846 GO:0003735|GO:0005840|GO:0006412
Lal23g0727 412 MobiDBLite consensus disorder prediction 364 386 - -
Lal23g0727 412 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020|GO:0016021
Lal23g0727 412 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
Lal23g0727 412 PANTHER OS11G0588100 PROTEIN 10 351 - -
Lal23g0727 412 MobiDBLite consensus disorder prediction 372 386 - -
Lal23g0727 412 PANTHER WAT1-RELATED PROTEIN 10 351 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0727 Lal-Chr23 9887462 9893615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0727 1 343 Nodulin-like Gene Family AT5G47470 56.977 3.72e-138 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0727 - - gmx:100809182 547.74