Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0724 ATGGCTCTTAATCTCTTAATCTCATTGCAGATACTTTTGGCTTTCACTTGCATAATGCATGCAGCAACAGTAACATGCACAGTTTCTTCTTCCACAAACTCATCCACCAAGCACAATTGGGTTGGACCAATTGGCCACCGTGTAATTAGCGTCGACGTTAATGGCGGTGGCCATTTTCGGTCGGTCCAAGCTGCCGTGAATGCTGTCCCGGAGAACAATAGAATGAACGTCCTTATACAAATCAGTGCCGGATATTACATAGAGAAAGTAGTGGTACCCGTGACAAAACCATACATAACATTTGAAGGAGAAGGAAGAGACGTGACAGTAATAGAATGGCATGATAGGGCAAGTGACCCTGGTCCCAACGGTCAACAACTACGTACTTATAGAACTGCTTCTGTCACTGTTTTTGCCAACTATTTTTCTGCTAGGAATATCACCTTCAAGAACACAGCGCCAGCACCAATGCCAGGGATGCAAGGATGGCAAGCCGCGGCGTTTAGAATATCAGGGGACAAAGCATACTTCTCTGGGTGTGGATTCTATGGTGCTCAGGACACTCTTTGTGATGATGCTGGACGCCATTATTTCAAGGATTGCTATATTGAAGGCTCTATTGATTTCATTTTCGGTAATGGAAGATCCATGTATAAGGATTGTGAGCTGCACTCTATAGCAACGAGGTTTGGGTCAATAGCAGCCCAAGATAGGAAATCACCAAATGAGAAGACGGGCTTCGCATTCGTAAGGTGCAAGGTAACAGGTAAAGGCCCGGTTTACGTGGGCCGGGCAATGGGCCAATACTCAAGGATTGTGTATGCATACACATACTTTGCTGATATAGTTGCACATGGTGGTTGGGATGATTGGAACAATGCAGACAACAATAACAAGACTGTGTTCTTTGGAGTGTACAAGTGTTGGGGCCCAGGAGCAGCTGCAATAAGTGGTGTCTCATTGGCCCAAGAACTTGATTTTGAAGCAGCCCATCCATTCCTTGTTAAGAGTTTTGTCAATGGGAGACACTGGATTGCACCATCTGATGCTTAA 1053 0.452 MALNLLISLQILLAFTCIMHAATVTCTVSSSTNSSTKHNWVGPIGHRVISVDVNGGGHFRSVQAAVNAVPENNRMNVLIQISAGYYIEKVVVPVTKPYITFEGEGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNITFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRKSPNEKTGFAFVRCKVTGKGPVYVGRAMGQYSRIVYAYTYFADIVAHGGWDDWNNADNNNKTVFFGVYKCWGPGAAAISGVSLAQELDFEAAHPFLVKSFVNGRHWIAPSDA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0724 350 ProSitePatterns Pectinesterase signature 2. 203 212 IPR033131 -
Lal23g0724 350 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 16 349 - -
Lal23g0724 350 PANTHER PECTINESTERASE 68-RELATED 16 349 - -
Lal23g0724 350 SUPERFAMILY Pectin lyase-like 46 347 IPR011050 -
Lal23g0724 350 Gene3D - 45 349 IPR012334 -
Lal23g0724 350 Pfam Pectinesterase 50 341 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0724 Lal-Chr23 9869003 9872791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0724 2 350 Carbohydrate Esterase AT5G47500 70.787 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0724 - - cam:101501763 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0724 23 9869003 9872791 Lal23g0724 23 9869003 9872791 ECH