Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0716 ATGTGTAACATTGTATCTAAGTACACTGGACAACAAATTTCTTCACTTTCTTCAATTCCAGCAATTAATATATCCCCTATGAACGTGTCTATGAGGACTAGTACTATAGGAAAGCAACAAGGATTCTTTGACGGCGGTGGAAACGGCGGTGCCGGTGGCAGCAACTCTTCTCTTGATACCAATATTAATCTTCGCCAAGAGGCTTCTTCTTCTTCTTGTAATGCTACCCCAAATTTGCCTCCACCTGGTTCCTTATCAGGAATAATTGATGAGCCTCTCATGTCAACAATTGGTACTATTGCCTTTGAAGAATTTATGAGACTCTTGCACACAAATGAACCCTTGTGGTTAAAGTCACCCACTCATGGCAGAGATGTTCTTAATTTTGAGACATATGAAAGAATGTTCCCCAAGGAAAATACTCGCCTCACCAATCCTAATGTTCGTGTTGAAGCATCGAGAGACTCAGCTTTTGTTATGATGAAAAGTTCTAGTTTGGCAGAAAAGTTCATGGATCCTAATCAATGGAAGGAAATTTTTGCTCCTATTGTTTCAGCTGCAAAGACCATAAAGGTTATATCTAGTGTCATGGGTGGTAGCAATAATGGTTCATTGCAGCTGATGTATCAAGAGTTACAAGTGTTGTCTCCACATGTTTCTACTCGAGAGTTCCACTTTCTTCGTTACTCACAAGAGATTGAAAAGGGAACATGGGCAATAGTTGACGTTTCATATGATAATCCACAAGACAAACAGTGCATGCCACAATTTCGCTCTCACCGTTTTCCTTCTGGTTGCCTAATCCAAAACATGCCTAATGGTCAATCCAAGGTTACATGGATTGAACATGTAGAGGTTGAAGACAAAACTCCTATCCATAAATATTTTAGAAACTGTATATATAGTGGAATGGCCTTTGGGGCAGAAAGATGGCTTGCTATACTTCAGAGAATGTGTGAAAGGATGTCTTCTCTTACCGTGACAACCAATTCCACTCGTGGCCTTGGAGGAGTGATTACCTCTCCAGAAGGAAAGACAAGTATGCTGAAACTTTGTCAAAGGATGGTCACAAATTTCTGTGCTAGTGTTGGCACATCAAATGGCCAAAACTGGACCACAACGTTTGGGTCAAATGAGATTAGATTCAGAGTCACTTCCCATAAGAGCAAAGACCCAAAACAAACTAATGGTGTGGTTCTAAGTGCTGCCACTACAATCTGGCTCCCAATCCCTCTACACATTGTGTTCAATTTTTTTAAGGATGAGAAAAGAAGACCTCAGTGGGATGTTCTTTCCAATGGTAATCCTATGCAAGAGGTTGCAAACATAGTAAATGGTTCTCACCCTGGTAACTCCATATCCATTCTTCAAGACTTCAACACAACTAAAAATGGAATGTTGATACTCCAAGAGAGTTGCATAGATTCTTCTGGTGCACTTGTGGTTTATTGCCCAGTTGATCTTCCATCAATCAACAAAGCAATGAGTGGTGAAGACCCTTCATTCATTCCCTTAATACCATCTGGATTTTCGATTTCACCGGACGGCCATCGCCGCCGCGGAGGAGGAGATAGAGCATCAACAAGCTCAAGCTTAACCAGAAGCATAGGAGGGAGTGGTGGATCATTGATCACAATTTTATTCCAAATACTTGTGAGTAACATTCCTTCAGCAGAAATCAATATGGACTTAGTGGCACATGTTACTAAGCTTATTAACACAGCTATCCAACAGATTAAGGTTTCATTGAATTATCCTAGCTCCTTATCATGA 1773 0.4067 MCNIVSKYTGQQISSLSSIPAINISPMNVSMRTSTIGKQQGFFDGGGNGGAGGSNSSLDTNINLRQEASSSSCNATPNLPPPGSLSGIIDEPLMSTIGTIAFEEFMRLLHTNEPLWLKSPTHGRDVLNFETYERMFPKENTRLTNPNVRVEASRDSAFVMMKSSSLAEKFMDPNQWKEIFAPIVSAAKTIKVISSVMGGSNNGSLQLMYQELQVLSPHVSTREFHFLRYSQEIEKGTWAIVDVSYDNPQDKQCMPQFRSHRFPSGCLIQNMPNGQSKVTWIEHVEVEDKTPIHKYFRNCIYSGMAFGAERWLAILQRMCERMSSLTVTTNSTRGLGGVITSPEGKTSMLKLCQRMVTNFCASVGTSNGQNWTTTFGSNEIRFRVTSHKSKDPKQTNGVVLSAATTIWLPIPLHIVFNFFKDEKRRPQWDVLSNGNPMQEVANIVNGSHPGNSISILQDFNTTKNGMLILQESCIDSSGALVVYCPVDLPSINKAMSGEDPSFIPLIPSGFSISPDGHRRRGGGDRASTSSSLTRSIGGSGGSLITILFQILVSNIPSAEINMDLVAHVTKLINTAIQQIKVSLNYPSSLS 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0716 590 SMART START_1 96 321 IPR002913 GO:0008289
Lal23g0716 590 MobiDBLite consensus disorder prediction 50 81 - -
Lal23g0716 590 ProSiteProfiles START domain profile. 87 324 IPR002913 GO:0008289
Lal23g0716 590 SUPERFAMILY Bet v1-like 342 579 - -
Lal23g0716 590 Pfam START domain 103 321 IPR002913 GO:0008289
Lal23g0716 590 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 3 584 IPR042160 -
Lal23g0716 590 CDD START_ArGLABRA2_like 92 320 - -
Lal23g0716 590 MobiDBLite consensus disorder prediction 38 87 - -
Lal23g0716 590 SUPERFAMILY Bet v1-like 101 323 - -
Lal23g0716 590 MobiDBLite consensus disorder prediction 513 535 - -
Lal23g0716 590 Gene3D - 111 305 IPR023393 -
Lal23g0716 590 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG12-RELATED 3 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0716 Lal-Chr23 9803184 9807772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0716 1 588 Homeobox Transcription Factor Family AT1G73360 50.746 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0716 K09338 - gmx:100785023 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0913 16 6015043 6018917 Lal23g0716 23 9803184 9807772 LSH
Lal15g0896 15 6745523 6749358 Lal23g0716 23 9803184 9807772 LSH
Lal23g0716 23 9803184 9807772 Lal8g0493 8 3370101 3373345 PCT
Lal23g0716 23 9803184 9807772 Lal25g0506 25 3574847 3578252 PCT
Lal23g0716 23 9803184 9807772 Lal10g0928 10 16672584 16676709 PCT
Lal8g0493 8 3370101 3373345 Lal23g0716 23 9803184 9807772 PCT
Lal25g0506 25 3574847 3578252 Lal23g0716 23 9803184 9807772 PCT
Lal10g0928 10 16672584 16676709 Lal23g0716 23 9803184 9807772 PCT