Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0714 ATGATGGCGGAAACAAATTCGGTTGATGTGATTTTGGACTTTCTGAAGAAGAACCAATTCACGAGAGCTGAGGCAGCTTTGCGTAGTGAGATCAATAACCGTCCAGACTTAAATGGCTTCTTCCAGAAACTTACATTGGAAGAAAAGGCCTCACATGATACACCACAAAATGATAAAGGGAAGGTGGCTGTAGAGATTCAAGGGGCAGATTCTCGTGAAAGTGAATTTTCTAAAGAACTGATTGTGAAGGAAATAGAATGCGGGACTGGTAGAAGTGCATCTGAAACCAAATGGAAAACTTCTGCTCCTTCTGTAAGTGAACGGAATAAATCGATTGGGACGAGTGACAAACACTTTACTTTCTCTAAGAGTTCAGAAGACAGTTTGCTTGATTTATGCTCACTGAAGTCCTATCCTACCAATGGTCCTGTGGATCCGTACCAAAATGATGCTGGTGGTAGGGCTAATAATAGTTCAAAGGCTTCTGTATCTCAACAGCCAAAATATCAAACTAATGAAGATGTTGCTGCAGTTGCAACCAATAGTAATGCCAAGTTTGGTGAGGAAAGTACTCTGCTTGCAGCTAATAAATCCTTGTGGCTTGGAAGTAGTATTAAAGCATCTGTGGAACCAAAGTATGACCTTGTGGTGCAAAGCAAAGAACCAAGAGAACACGATCGCCAACTAAAATTTAATAGTTCAGCTCTTAAAGTCAACTTTTCAGACAATCCCTGGTCTAGAACTGATGAGAATGCGAACTCTTCTTCAGACACATGGAATTGTTCTGTCAAGACTGTTTTTCCCTTCCCAAAGGGGGATATGCCTACAAGCTTTGATGGTGCAGTTTATTCTGACAAAAATGAGGAAAAAAGAAGGGTACAAATTAGTGATACTAGGGCATCTATAAAAGAGCAGGTGGATGAAGTAGGGAGAGCTATTTTCTTGGGCAAGTCACACGGAAGTTCCGAACTGAAGACAATTGGCAGTTTAAGTTTTCCTCTTGTGTCTGAAAGTCAGAGGGAAGAATTTCCTAGGCTTCCTCCTGTTAAACTCAAGCCAGAAGATAAGCCCTTGCCTGTTAAGTGGGAGGAGAAGTTTGAGAGAGATGGACCGACTTCGAAATTCTCTGGTGGCGACAGCACTTTACATATCGGTTCATATATGGATGTGCCAATTGGGCAAGAAGTTAACCCTTCAGGTATGAAGAGGGCTACAGGGGGAAGCTGGTTATCTGTGAGTCAAGGGATAGCAGAGGACACATCTGATCTTGTATCGGGTTTTGCAACAATTGGTGATGGGTTGAATGAATCTGTCGACTATCCGAATGAATATTGGGACTCTGATGAATATGATGATGATGATGATATTGGGTACATGAGACAACCTATTGAGGATGAAGCCTGGTTTTTGGCACATGAAATTGACTATCCTAGTGACAATGAAAAGGGGACTGGGCACGGAAGTGTTCCAGATCCTCATGAAAGAGGTCTAGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTCTCTGGAGAGCGATATCTTCAAGTGAGTAATGTTGAACCAGTCACAGCATCAGATGATCCCATTGGTCTAATAGTTACTGAAATGTATGGAAGTACCAATGATAATGATTTAATGGCTCAATACGATGGACAATTGATTGATGAAGAAGAATTAAGTCTAATGCGTGCGGAACCTGTCTGGCAAGGATTTGTCAGTCAGTCAAATGATCTCATCATGCTAGGAGATGGAAAGGTTCTGGATGATAGTGTGAGATCACGACTAGAGGATATCTGTATGGATGATGATCAACATGGTTCAGTTAGGTCTATTGGGGTGGGGATCAACAGTGATGCTGCAGATATTGGTAGTGAGATGCGTGAAACTTTGGTTGGTGGTAGCAGTGAAGGGGATCTAGAATATTTCCGAGATCGTGACATTGGGGTTGGTTCCTTCAAACACTCACATCATGATTTGGATAAGAGTTCTATTAGTAAATCAAACAAAAATAAGAAGAAAAATGACAAGAATGAGTCAAATAAATATGTCAACGGGGGTGGTAAGGATGCACAGTTGCAGATGAAAACACATGGTGATGGGAACTTCTCATTTTCTCTATCTTCGAAAGATGGCCAGATGGCTGAGGCTGCCTCTAAACTGTCCCCATATTCAAATAACTGCAATGCATATGAAACTGATGAATGTCTTGATGCATTTGAGGGATCAGATGACATGCTTGCTTTATGGAAGCAGAAGAGCAGTGATTCTTCACCCATTAGAAGTTCTAGGGATGAGAATAATGCTAACCAAGTAAGATCCAGAAACTCTTCTCCAGCAACAGTCTCAAATTACAGATATTCTGAAAGAGAGCATATCAAGCCAGAAGAGGATGAAAAAGTTGGCGCTGCAAGGGAGGATGATCTAGGGGCTTCACTAGAGGATGAAGAGGCTGCTGCTGTGCAGGAGCAAGTAAGGCAAATAAAGGCCCAGGAGGAGGAATTTGAAACCTTTGATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGAAGGTATCATGTCAGTGAATATTTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGATCTGCACACAGGCATGGATGTCTGTGTAAAAATTATAAAGAACAACAAGGATTTTTTTGACCAAAGCCTTGATGAAATCAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGGAGACAAGTATCACCTTCTCCGGTTATATGATTATTTCTATTATCGAGAACATTTGTTGATAGTGTGTGAACTACTTAAAGCAAACTTATATGAGTTTCATAAATTCAATAGAGAATCAGGGGGTGAAGTGTATTTCACAATGCCAAGATTGCAGTCAATTACCATTCAGTGTTTGGAAGCACTTCAGTTTTTGCATAGCCTCGGATTAATACATTGTGATTTGAAGCCAGAGAATATTTTGGTTAAAAGCTATAGTAGATGTGAGGTGAAGGTCATTGATCTTGGCAGCAGTTGTTTTGAGACAGATCACCTGTGCTCTTATGTTCAGTCACGGTCCTATCGTGCCCCTGAGGTTATTTTGGGGCTTCCATATGACAAGAAGATTGATATCTGGTCACTTGGCTGCATCTTGGCTGAACTATGTACTGGCAATGTCCTCTTTCAAAATGATTCACCTGCCACATTACTTGCTCGTGTAATTGGGATCATCAGTCCAATTGATCAAAGTATGCTTGCAAAAGGACGAGATACATATAAGTACTTCACCAAAAATCATATGCTTTACGAACGGAATCAGGAAACCAACAGGTTAGAATACTTGATTTCAAAAAAGACATCTTTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGACTTTGTTGCTCATTTGCTTGAGATCAACCCAAAGAAGCGTCCTTCGGCATCTGATGCCCTAAAGCACCCATGGTTATCATACCCTTATGAACCCATATCATCTTGA 3558 0.4095 MMAETNSVDVILDFLKKNQFTRAEAALRSEINNRPDLNGFFQKLTLEEKASHDTPQNDKGKVAVEIQGADSRESEFSKELIVKEIECGTGRSASETKWKTSAPSVSERNKSIGTSDKHFTFSKSSEDSLLDLCSLKSYPTNGPVDPYQNDAGGRANNSSKASVSQQPKYQTNEDVAAVATNSNAKFGEESTLLAANKSLWLGSSIKASVEPKYDLVVQSKEPREHDRQLKFNSSALKVNFSDNPWSRTDENANSSSDTWNCSVKTVFPFPKGDMPTSFDGAVYSDKNEEKRRVQISDTRASIKEQVDEVGRAIFLGKSHGSSELKTIGSLSFPLVSESQREEFPRLPPVKLKPEDKPLPVKWEEKFERDGPTSKFSGGDSTLHIGSYMDVPIGQEVNPSGMKRATGGSWLSVSQGIAEDTSDLVSGFATIGDGLNESVDYPNEYWDSDEYDDDDDIGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPHERGLAKDEDDDQSFAEEDSYFSGERYLQVSNVEPVTASDDPIGLIVTEMYGSTNDNDLMAQYDGQLIDEEELSLMRAEPVWQGFVSQSNDLIMLGDGKVLDDSVRSRLEDICMDDDQHGSVRSIGVGINSDAADIGSEMRETLVGGSSEGDLEYFRDRDIGVGSFKHSHHDLDKSSISKSNKNKKKNDKNESNKYVNGGGKDAQLQMKTHGDGNFSFSLSSKDGQMAEAASKLSPYSNNCNAYETDECLDAFEGSDDMLALWKQKSSDSSPIRSSRDENNANQVRSRNSSPATVSNYRYSEREHIKPEEDEKVGAAREDDLGASLEDEEAAAVQEQVRQIKAQEEEFETFDLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVSEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIISPIDQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLISKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSYPYEPISS 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0714 1185 MobiDBLite consensus disorder prediction 151 172 - -
Lal23g0714 1185 MobiDBLite consensus disorder prediction 479 509 - -
Lal23g0714 1185 SUPERFAMILY Protein kinase-like (PK-like) 863 1178 IPR011009 -
Lal23g0714 1185 Gene3D Phosphorylase Kinase; domain 1 868 955 - -
Lal23g0714 1185 PANTHER - 3 1183 - -
Lal23g0714 1185 Pfam Protein kinase domain 874 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0714 1185 Gene3D Transferase(Phosphotransferase) domain 1 928 1176 - -
Lal23g0714 1185 MobiDBLite consensus disorder prediction 93 118 - -
Lal23g0714 1185 MobiDBLite consensus disorder prediction 479 502 - -
Lal23g0714 1185 MobiDBLite consensus disorder prediction 757 790 - -
Lal23g0714 1185 MobiDBLite consensus disorder prediction 92 118 - -
Lal23g0714 1185 MobiDBLite consensus disorder prediction 659 685 - -
Lal23g0714 1185 MobiDBLite consensus disorder prediction 757 807 - -
Lal23g0714 1185 CDD PKc_DYRK_like 874 1176 - -
Lal23g0714 1185 MobiDBLite consensus disorder prediction 792 807 - -
Lal23g0714 1185 PANTHER DUAL SPECIFICITY PROTEIN KINASE 3 1183 - -
Lal23g0714 1185 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1000 1012 IPR008271 GO:0004672|GO:0006468
Lal23g0714 1185 MobiDBLite consensus disorder prediction 659 712 - -
Lal23g0714 1185 SMART serkin_6 874 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0714 1185 ProSiteProfiles Protein kinase domain profile. 874 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0714 1185 MobiDBLite consensus disorder prediction 140 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0714 Lal-Chr23 9783775 9794048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0714 873 1171 MAP Kinase Gene Family AT5G19010 30.408 1.07e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lal23g0714 Pkinase 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0714 - - lang:109331412 2174.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0918 16 6054597 6063464 Lal23g0714 23 9783775 9794048 LSH
Lal15g0900 15 6766500 6778495 Lal23g0714 23 9783775 9794048 LSH