Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0706 ATGCACAACCCCTTCACTCTTTTCCTCTTCCTTCTTCTTCTCCCTTTCTCAAAACCAGATCTTTCTTCCGAACGCGCCGCCTTACTCTCCCTCCGCTCCTCCGTCGGCGGCAGAACCCTTTTCTGGAACGCCACCAATCAAAGCCCATGCAACTGGGCCGGTGTCCAATGCAACCACGGCCATGTTGTCGAGCTCCACCTCCCCGGAGTTTCACTTTCCGGCCAACTACCCACCGGAATATTCTCCAACTTAACTCACCTCCGTACCCTCAGTCTCCGTTTCAATGCCCTTACCGGTCACATTCCTTCGGATCTCGCTTCCTGCACCAACCTCAGAAACCTTTACTTGCAAAGAAACCTTCTTTCCGGTTCAATCCCTGATTTTCTGTTCAGTTTAACCGATTTGGTTCGGGTTAATATCGGGTTTAATAATTTCTCGGGTCAGTTCTCGACCGGGTTTAATAACTTAACTCGGTTGAGGACTTTGTTTCTTGAGAATAACCAGCTTCATGGTTCTATACCTGATTTGAGCAATGTTGTTAATCTTGAACAGTTTAATGTTTCTAATAATTTGTTGAATGGGTCTGTGCCTTTAAAGTTTGGGACTTTTAGTCAAGATTCGTTTTTGGGTAACTCACTTTGTGGGAAACCACTTAGTCTATGTGCTGGTGATGATGGAAATGGAAGTGGAAGTGTTCCTGTTGAAATTGAGATCAATGGGGGAAAGAAGAAGAAGAAGAAGAATAAGTTATCGGGTGGTGCTATTGCTGGAATTGTAATTGGATCTGTGGTGGGTCTTTTGTTGGTTGTGTTTGTTTTGATTCTTTTGTGTAGGAAGAAGAGTAACAGCAAGAAAACCAGTTCTGTTGATGTAGCAACCGTTAAAGATCGCGGATTGGAGGTCAACGGTGGCGAGAATAAGGTTAATGAAGTGGAGAATGGTGGTCATGGGAATGGTAATGGTAATGGTAATGGGTATTCTGTGGCTGCAGTGGCAGCTGCGGCGCTGACGGGGAATGGGAACAAGGGTGGTGAGGTTGTTAATGGTCGTGGAGCGAAAAAGTTAGTGTTTTTCGGGAATTCAGTAAGAGGGTTTGATTTGGAGGATTTGTTGAGAGCTTCTGCTGAAGTTTTGGGGAAGGGGACTTTCGGGTCGGCGTATAAGGCAGTTTTGGAGGTTGGTCCGGTTGTGGCTGTGAAAAGGTTGAAGGATGTGACCATTTCTGAGAAGGAGTTTAAGGAGAAGATTGAAGTAGTTGGAGCAATGGATCATGAGAGTTTGGTTCCTCTCAGGGCTTACTATTTTAGCAGGGATGAGAAGCTTCTTGTGTATGATTACATGTCAATGGGAAGTTTGTCTGCACTTTTACATGGAAACAAAGGAGCAGGTAGAACACCATTGAGTTGGGAACTCAGATCAGGCATTGCACTTGGAGCTGCACGCGGCATTGAGTACCTACATTCACAAGGGCCTAATGTTTCTCATGGAAACATAAAGTCGTCTAATATCCTCTTAACGAAATCATATGAAGCAAGAGTATCTGATTTTGGCCTTGCACACCTGGTTGGCCCCTCTTCTACTCCTAATCGCGTTGCCGGCTACCGCGCGCCTGAGGTGACCGATCCTTGCAAAGTATCTCAAAAGGCAGATGTGTACAGTTTTGGTGTATTGCTCTTGGAACTTCTAACCGGGAAAGCGCCAACACATGCTCTTCTAAATGAAGAAGGGGTAGACCTCCCTAGATGGGTGCAATCTGTTGTTAGAGAGGAGTGGACTTCCGAGGTTTTCGATCTTGAGCTCCTTAGGTATCAGAATGCTGAAGAGGAGATGGTTCAGTTGTTGCAGCTTGCAGTTGATTGTGCAGCACCGTACCCCGATAAACGCCCTTCAATGTCCGAAGTAGCACAAAGCATCGAAGAATTACATCGTTCTAGGTTGAAAGAGAATCAAGACCAAATCCAGCATCATGATTTCATCAATGATATATAG 1989 0.4545 MHNPFTLFLFLLLLPFSKPDLSSERAALLSLRSSVGGRTLFWNATNQSPCNWAGVQCNHGHVVELHLPGVSLSGQLPTGIFSNLTHLRTLSLRFNALTGHIPSDLASCTNLRNLYLQRNLLSGSIPDFLFSLTDLVRVNIGFNNFSGQFSTGFNNLTRLRTLFLENNQLHGSIPDLSNVVNLEQFNVSNNLLNGSVPLKFGTFSQDSFLGNSLCGKPLSLCAGDDGNGSGSVPVEIEINGGKKKKKKNKLSGGAIAGIVIGSVVGLLLVVFVLILLCRKKSNSKKTSSVDVATVKDRGLEVNGGENKVNEVENGGHGNGNGNGNGYSVAAVAAAALTGNGNKGGEVVNGRGAKKLVFFGNSVRGFDLEDLLRASAEVLGKGTFGSAYKAVLEVGPVVAVKRLKDVTISEKEFKEKIEVVGAMDHESLVPLRAYYFSRDEKLLVYDYMSMGSLSALLHGNKGAGRTPLSWELRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPCKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNAEEEMVQLLQLAVDCAAPYPDKRPSMSEVAQSIEELHRSRLKENQDQIQHHDFINDI 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0706 662 Gene3D Transferase(Phosphotransferase) domain 1 447 661 - -
Lal23g0706 662 Gene3D Phosphorylase Kinase; domain 1 344 446 - -
Lal23g0706 662 Gene3D Ribonuclease Inhibitor 176 225 IPR032675 -
Lal23g0706 662 SUPERFAMILY L domain-like 37 203 - -
Lal23g0706 662 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 662 - -
Lal23g0706 662 PANTHER OS05G0588300 PROTEIN 3 662 - -
Lal23g0706 662 CDD STKc_IRAK 378 641 - -
Lal23g0706 662 Gene3D Ribonuclease Inhibitor 21 175 IPR032675 -
Lal23g0706 662 ProSitePatterns Protein kinases ATP-binding region signature. 378 400 IPR017441 GO:0005524
Lal23g0706 662 ProSiteProfiles Leucine-rich repeat profile. 158 180 IPR001611 GO:0005515
Lal23g0706 662 SUPERFAMILY Protein kinase-like (PK-like) 376 641 IPR011009 -
Lal23g0706 662 Pfam Protein kinase domain 375 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0706 662 ProSiteProfiles Protein kinase domain profile. 372 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0706 662 Pfam Leucine rich repeat N-terminal domain 22 58 IPR013210 -
Lal23g0706 662 Pfam Leucine rich repeat 74 121 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0706 Lal-Chr23 9720184 9723345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0706 20 657 Receptor kinase-like Gene Family AT1G48480 63.003 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal23g0706 Pkinase 8.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0706 - - gmx:100818955 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0706 23 9720184 9723345 Lal23g0706 23 9720184 9723345 ECH
Lal16g0927 16 6149320 6152248 Lal23g0706 23 9720184 9723345 LSH
Lal15g0907 15 6874526 6878054 Lal23g0706 23 9720184 9723345 LSH