Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0697 ATGTCTTGTTGTTCCATGTGGAATGGTAATGCAAAAGGGAGAGGGATAAAAGAAATGGGAGGAGACAAAGATTCACCAAAGACACCAGGAGAACAAGGTAAATCACTCATGGAAGACATCCTCGGTCTTCTTAGGATTCACATCAAGCGCGGGGTCAACCTCGCCGTTCGTGATGTCAATACAAGCGATCCATATGTGGTCGTTAGGATGGGCAAACAGAAACTCAAGACTCGTGTGATTAAAAAGGATGTTAATCCTGAGTGGAATGAAGACCTTACACTTTCTGTTTCTAATCCGGTTTGTCCAATCGTGCTGACTGTGTATGATCACGATACATTTAGCAAAGATGACAAAATGGGAGATGCAGAATTTGACATAACACCATTTATAGAAGCCTTAAAGATGAACACAGAAGGGCTCCCAAATGGAACTATAATAAGGAGAATACATCCAAGCAGAAAAAATTGTTTGGCTGATGATAGCTGCATTGTTTTTAATGATGGCAAAGTTGTTCAAGATATTGTCCTTAGATTGAGAAATGTTGAGTGTGGTGAAGTTGAAATCCAAATGGAATGGATTGATCTTCCTGGTTCCAAGATCTTATAA 606 0.3993 MSCCSMWNGNAKGRGIKEMGGDKDSPKTPGEQGKSLMEDILGLLRIHIKRGVNLAVRDVNTSDPYVVVRMGKQKLKTRVIKKDVNPEWNEDLTLSVSNPVCPIVLTVYDHDTFSKDDKMGDAEFDITPFIEALKMNTEGLPNGTIIRRIHPSRKNCLADDSCIVFNDGKVVQDIVLRLRNVECGEVEIQMEWIDLPGSKIL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0697 201 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 40 127 IPR035892 -
Lal23g0697 201 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 29 200 IPR044562 -
Lal23g0697 201 CDD C2_ArfGAP 41 184 - -
Lal23g0697 201 Pfam C2 domain 42 128 IPR000008 -
Lal23g0697 201 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 29 200 - -
Lal23g0697 201 ProSiteProfiles C2 domain profile. 28 140 IPR000008 -
Lal23g0697 201 SMART C2_3c 43 138 IPR000008 -
Lal23g0697 201 MobiDBLite consensus disorder prediction 1 34 - -
Lal23g0697 201 Gene3D C2 domain 38 199 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0697 Lal-Chr23 9659610 9660502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0697 74 201 C2H2 Transcription Factor Family AT1G70790 56.923 2.28e-48 153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0937 16 6220596 6230246 Lal23g0697 23 9659610 9660502 LSH
Lal23g0697 23 9659610 9660502 Lal10g0945 10 16792295 16794364 PCT
Lal10g0945 10 16792295 16794364 Lal23g0697 23 9659610 9660502 PCT