Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0693 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCTAACCAATCAGAAGATACAGCAGCACAAGGGTCTACTACTTCATCAAGGGGAAACAAGTTCAATGATGGTTCATCTACCCCGAAAAAGATTTCGAATTGGTTGCATTCAGTTTCTAATAGGCAGAGTCCCAGTCCTCCATCTCCCAGAAGAGTGGAGCTATTTGATTCAGTGAGCAGTGGTGGTTTGGACATTGTTTATTATCCAGCGAGGCGCGATTCGGGGTCTAGCACTTCAAGGGATCCTGAAATGGAAGAAGAATATCAGATTCAATTGGCTTTGGAGTTGAGTGCAAAAGAGGATCCTGAAGCTGTGCAAATTGAAGCTGTTAAGCAAATCAGTTTAGGATCTTGTGACCCTGATAATACACCGGCTGAAGTTGTGGCCTACAGATACTGGAATTACAATGTTCTTGGTTATGATGATAAGATCTCAGATGGTTTCTATGACCTTTATGGGATCTTAACCGAGTCAACCTCTGCAAGAATGCCTTCCCTAGTAGATCTGCAAGGAACACCAACCGCCGATGGTGTCATATGGGAAGCAGTCTTGGTCAATAGGACAAAAGATTCCAATTTGTTGAAACTTGAGCAAAAAGCGCTAGAACTGGCCGGCGAGTCAAGAACAGAATTTGAAGTTGTCGTAGATAGTAGTTTGGTGCACAAGATTGCAATATTAGTGGCTGACTATATGGGTGGACCCGTTGAAGATCCTGCAAGCATGACTAGAGCATGGCGGAGTCTTTGTTACAGTCTAAAAGCAACCCTTGGTAGCATGGTTTTGCCACTTGGTTCACTAACCATTGGATTGGCTCGGCATCGTGCATTGTTATTTAAGGTACTTGTCCCAGCATTTTCTTTTCTGGTTTTAGCTGATAGTTTAGGCATCCCATGCCGGTTGTTGAAAGGACTGCAATATACTGGTTCGGATGATGTGGCAATGAACTTCGTCAGAATTGATGATGGAAGGGAGTACATTGTTGACCTCATGGCAGATCCTGGAACACTTATCCCGTCTGATGCAACTGGATCACATATCGAGTACGATGAATCTTCTTTTGGCTTTGATTCCTCTCATATAGCATCGTCAAGCAACAAAGTTCGAAGTTTGTCTGAAGAAACTTCAGACTTTGGGACAGTGGATAAAGGAAACAGATCAGAACTTCATGCATACACAGAAAAAGAATCTGTAGTAATCAAACCTTCTACAAGCAAGGAGGAATTAAAGAGACCACCAAGTGAATTAAAAAATACTCCCAATGAAGAGAAAATCACAGTGAGTGATTCTCCTAGCAGACCTAATTATCCATATATGCATGGAAGATCTCCTTCTTGGACTGAAGGCATAAGTTCCCCCGCAGTACGTAGAATGAAAGTCAAAGATGTGTCACAATATATGATTGATGCTGCAAAGGAGAACCCAAACTTAGCTCAAAAACTTCACGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTGCAAACTTATTTTCTGAAATTTATCATGACCACTTAGGTTCCTCATCCGAGGCTAGTTTACCAACTACAGAAAAAGATGAATTTAAACAGGGAAGTGTACATAAAAAAACTAAGGCTTTATTTTTGCCTCCTTTGCCTCACCTCAGACTTCATTCCAAAGAAAATCCTACAAGTCAGCCGGTGTCTTCTAAGCCTGTAGAAGGTTTAGGAACCGGCCTTCCTCTTGATACAAGGGCAAACTCTGTTCAACACACACTATCTCACGAAGAAGCATCGCAGGCAAAATACGGGGAAAATGTACCGGTTGCTGCTGCAGCAGCAGCAGCTGCTGCTGTTGTTGCATCTTCTATGGTAGTTGCAGTAACGAAGTCAAGCACTGAATCAAATATCGAGATTCCTCTAGCAGCTGCTACTGCTACAGCTGCAGCTGTTGTAGCAACTACTGCTGCTGTCAGTAAACAGCATGAGCAGGGCAGTCGGAGTGACAGAGATACGGATGGTACTGGTTTTGAGCTGAAGGGTAGTGGTGATGGGGAGAATATTGCTTCGGGAGCAAACTCAGAAGGCGAGAGAATATCTGATAGATCAGTAAGTAATGACAGCACAAGATCTGAATCCGCGCTGGATGATGTTGCTGAGTATGACATTCCATGGGAGGAAATCACGATGGGCGAGCGTATTGGACTTGGATCATATGGGGAAGTGTACCGAGGTGAATGGCATGGAACTGAGGTTGCTGTAAAAAGGTTTCTTGATCAAGATTTCTATGGTGAAGCACTTGATGAGTTCAAAAGTGAGGTCCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACTCGACCACCAAATCTTTCAATTGTTACTGAGTTTCTTCCCAGAGGGAGTCTGTATAGATTAATTCACCGACCTAGCAATCAATTAGATGTTCGAAGGCGGTTGAGGATGGCCCTGGATGCTGCTCGAGGAATGAACTATTTGCACAACTGCACTCCAATGATAGTGCATCGTGATTTGAAGTCCCCGAATCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTTTGTGATTTTGGCTTATCGCGAATGAAGAATAGTACATTTCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCAGAAGTGCTGAGAAATGAACTTTCAGATGAAAAGTGCGACGTTTATAGCTATGGGGTCATATTATGGGAGCTCTGTACTTTGCAGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAACATCGCCGGCTTGACATTCCGGATGATATAGACCCGGCCGTTGCAGATATTATCAGGCAATGCTGGCAGACAGATCCAAAGATGAGACCAACATTTGCTGAAATCATGGCTGCTCTGAAGCCATTGCAGAAGCCAATTACTAGTTCTCAAGTGCCTAGACCAAGTTCTCAGTCACCAAGAGTTGCTAAAGATTCAGTTCAATAG 3015 0.4328 MKNILKKLHIMSNQSEDTAAQGSTTSSRGNKFNDGSSTPKKISNWLHSVSNRQSPSPPSPRRVELFDSVSSGGLDIVYYPARRDSGSSTSRDPEMEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNVLGYDDKISDGFYDLYGILTESTSARMPSLVDLQGTPTADGVIWEAVLVNRTKDSNLLKLEQKALELAGESRTEFEVVVDSSLVHKIAILVADYMGGPVEDPASMTRAWRSLCYSLKATLGSMVLPLGSLTIGLARHRALLFKVLVPAFSFLVLADSLGIPCRLLKGLQYTGSDDVAMNFVRIDDGREYIVDLMADPGTLIPSDATGSHIEYDESSFGFDSSHIASSSNKVRSLSEETSDFGTVDKGNRSELHAYTEKESVVIKPSTSKEELKRPPSELKNTPNEEKITVSDSPSRPNYPYMHGRSPSWTEGISSPAVRRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPANLFSEIYHDHLGSSSEASLPTTEKDEFKQGSVHKKTKALFLPPLPHLRLHSKENPTSQPVSSKPVEGLGTGLPLDTRANSVQHTLSHEEASQAKYGENVPVAAAAAAAAAVVASSMVVAVTKSSTESNIEIPLAAATATAAAVVATTAAVSKQHEQGSRSDRDTDGTGFELKGSGDGENIASGANSEGERISDRSVSNDSTRSESALDDVAEYDIPWEEITMGERIGLGSYGEVYRGEWHGTEVAVKRFLDQDFYGEALDEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPSNQLDVRRRLRMALDAARGMNYLHNCTPMIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKNSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVYSYGVILWELCTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDIDPAVADIIRQCWQTDPKMRPTFAEIMAALKPLQKPITSSQVPRPSSQSPRVAKDSVQ 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0693 1004 Pfam Ethylene-responsive protein kinase Le-CTR1 136 348 - -
Lal23g0693 1004 PRINTS Tyrosine kinase catalytic domain signature 798 811 IPR001245 GO:0004672|GO:0006468
Lal23g0693 1004 PRINTS Tyrosine kinase catalytic domain signature 837 855 IPR001245 GO:0004672|GO:0006468
Lal23g0693 1004 PRINTS Tyrosine kinase catalytic domain signature 884 894 IPR001245 GO:0004672|GO:0006468
Lal23g0693 1004 PRINTS Tyrosine kinase catalytic domain signature 903 925 IPR001245 GO:0004672|GO:0006468
Lal23g0693 1004 PRINTS Tyrosine kinase catalytic domain signature 947 969 IPR001245 GO:0004672|GO:0006468
Lal23g0693 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Lal23g0693 1004 MobiDBLite consensus disorder prediction 429 443 - -
Lal23g0693 1004 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 994 - -
Lal23g0693 1004 SUPERFAMILY Protein kinase-like (PK-like) 705 974 IPR011009 -
Lal23g0693 1004 MobiDBLite consensus disorder prediction 655 711 - -
Lal23g0693 1004 Pfam Protein tyrosine and serine/threonine kinase 724 976 IPR001245 GO:0004672|GO:0006468
Lal23g0693 1004 MobiDBLite consensus disorder prediction 981 1004 - -
Lal23g0693 1004 MobiDBLite consensus disorder prediction 1 65 - -
Lal23g0693 1004 Gene3D Phosphorylase Kinase; domain 1 717 801 - -
Lal23g0693 1004 MobiDBLite consensus disorder prediction 517 579 - -
Lal23g0693 1004 MobiDBLite consensus disorder prediction 375 448 - -
Lal23g0693 1004 ProSiteProfiles Protein kinase domain profile. 724 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0693 1004 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 994 - -
Lal23g0693 1004 CDD STKc_MAP3K-like 730 976 - -
Lal23g0693 1004 MobiDBLite consensus disorder prediction 389 428 - -
Lal23g0693 1004 MobiDBLite consensus disorder prediction 659 673 - -
Lal23g0693 1004 ProSitePatterns Protein kinases ATP-binding region signature. 730 751 IPR017441 GO:0005524
Lal23g0693 1004 SMART serkin_6 724 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0693 1004 MobiDBLite consensus disorder prediction 8 58 - -
Lal23g0693 1004 Gene3D Transferase(Phosphotransferase) domain 1 803 987 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0693 Lal-Chr23 9631496 9640796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0693 1 991 MAP Kinase Kinase Kinase AT1G73660 61.240 0.0 1137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lal23g0693 PK_Tyr_Ser-Thr 2.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0693 - - gmx:100778331 1499.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0693 23 9631496 9640796 Lal23g0693 23 9631496 9640796 ECH
Lal16g0949 16 6287444 6295900 Lal23g0693 23 9631496 9640796 LSH