Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0692 ATGGATCCTTACTCAACCTCGATCCTTCCTTCTTCTCCTACTACTCTTGCTCCTCCCCCACCACGCAATGTCGACCGCCCTTCTTATTCCAATATGATCTGCAGTGCAATTAGGGCTTTGAAAGAGAAAAATGGTTCAAGCAAGAGATCTATTGGGAAGTACATGAAACAAGAGTACAAAGACCTTCTTCCACCCAATCACGAAACCTTGTTGACCCAAAACCTAAACGACTTGAAGGAGAAGAACATTCTCATCATGGTTAAAAGATCCTACAAGTTCCCAGTTCCTAGTCCTCATCAGAATGCTGAGCCCAAATCAACTCAACTTGGGTTGAATGACGAGGGTGAATTTAGTAGCAGTGTTGTTGGTGCAACTACTGAAGTGAAGAAAATGGGTCAGGATCGTTCGTTGAAGGTCTCTGGTGAGGAAGAGGAGGTGAGTTCAATGCTGAGACTCGAAAATGGGAAAAGGGTTCGTCGTCCTTCGACAAAATATCAATCTTTTCCGACAGAGATAATTTCCAACGACCACAAGCGGAAGCCCGGGCGCCCACAAAAAGCCCATGTGAAGCCCGCCCGTAGTAATGGTGGTGGTGCCCTTGGGTCTTCCAAGCCCAGGGGGAGGCCTAAGAAGAATGTTGTTGCATCACCATCTATTGCTGGTAGTTCTGCTGCCTATGGTGGTGGTAAAAAGCCCGTTGTGGCGAGGAAGCCGAAGAAGAAAACCATTGAAAAGCCCGTGGGCTGCACAGAGGGATCAGAAGTTGACAAGCATAAGGATATTAAAGCTGACCTAAGAAACAAGTTTAAATTTATTAAAACACGGTTGAGCAGAGCTGTTACGGTGCTGAGGACTTATTTTCACAGGAGAAGTCCAGTCGTAACACGTATAGCAATTCACGATCTACAAGACCTGGCATCTTTGGACATGGATATGCTATTAACAAGAGGAGATACACCGCCGCCGACATTTCGAAAGCCGGGAGAGCGGCGGCCGCTACTGTTGTGCAGTAGTAAAAGGCTCAAGCGTAGTGTCAAAAGAGTTGGAAAAAAAGCAGAAATTTTCACGTGA 1071 0.4631 MDPYSTSILPSSPTTLAPPPPRNVDRPSYSNMICSAIRALKEKNGSSKRSIGKYMKQEYKDLLPPNHETLLTQNLNDLKEKNILIMVKRSYKFPVPSPHQNAEPKSTQLGLNDEGEFSSSVVGATTEVKKMGQDRSLKVSGEEEEVSSMLRLENGKRVRRPSTKYQSFPTEIISNDHKRKPGRPQKAHVKPARSNGGGALGSSKPRGRPKKNVVASPSIAGSSAAYGGGKKPVVARKPKKKTIEKPVGCTEGSEVDKHKDIKADLRNKFKFIKTRLSRAVTVLRTYFHRRSPVVTRIAIHDLQDLASLDMDMLLTRGDTPPPTFRKPGERRPLLLCSSKRLKRSVKRVGKKAEIFT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0692 356 Gene3D - 22 106 IPR036388 -
Lal23g0692 356 MobiDBLite consensus disorder prediction 132 160 - -
Lal23g0692 356 PRINTS Histone H5 signature 12 33 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Lal23g0692 356 PRINTS Histone H5 signature 39 56 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Lal23g0692 356 PRINTS Histone H5 signature 177 196 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Lal23g0692 356 Pfam linker histone H1 and H5 family 27 88 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lal23g0692 356 SUPERFAMILY "Winged helix" DNA-binding domain 23 104 IPR036390 -
Lal23g0692 356 MobiDBLite consensus disorder prediction 1 28 - -
Lal23g0692 356 CDD H15 26 88 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lal23g0692 356 PRINTS AT-hook-like domain signature 48 58 IPR017956 GO:0003677
Lal23g0692 356 PRINTS AT-hook-like domain signature 176 187 IPR017956 GO:0003677
Lal23g0692 356 PRINTS AT-hook-like domain signature 201 211 IPR017956 GO:0003677
Lal23g0692 356 PANTHER HISTONE H1-LIKE 7 188 - -
Lal23g0692 356 PANTHER HISTONE H1-LIKE 169 309 - -
Lal23g0692 356 SMART h15plus2 23 90 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lal23g0692 356 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 25 95 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lal23g0692 356 PANTHER HISTONE H1 169 309 - -
Lal23g0692 356 PANTHER HISTONE H1 7 188 - -
Lal23g0692 356 MobiDBLite consensus disorder prediction 132 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0692 Lal-Chr23 9620610 9624661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0692 19 98 Single Myb Histone (SMH) Gene Family AT1G49950 37.805 5.54e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0692 - - lang:109339991 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0950 16 6302725 6304807 Lal23g0692 23 9620610 9624661 LSH