Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0674 ATGGAGAAACCTCAAATGGGTTTTGGAGTTTCTTCATTATATTGTTTTGTTTTGGTTCTCTCTGTGATTGTTATCACAGCTAGGGGACAAGATTATGAGGTGATGATAATGTTGAAGAGAATGATCATCAATGCCCCCAACACTTTACAATGGACAGATCCTGATGTATGCAAATGGAATCACATTCAATGTGACAAAAGAAACCGTGTCATTGCTATTCAAATTGGTAACCAAACTCTTCAAGGTTCTCTCCCTAAGGAACTTGAGAATCTTTCACAGTTAACACGTTTTGAATGTCAAGGAAACAATTTCACTGGTGCTTTTCCTTATCTTTCAAAATCCTTACAGAAGTTGTTGATTCATGGCAACATGTTTAGCTCATTCCCCAATGATTTCTTCATGGCTATGAGCAATTTGGAAGAAGTGAGATTAGATGAAAACCCTTTCCCTCAATGGATGGTTCCTAATAGTTTAAAGGATTGTCTTGCCCTTCAGTCTTTCAGTGCTCAAAGTGTTGGTTTTGTTGGGACAATCCCAGATTTTTTTGGCAATGGTGGTCCTTTCCCTGGCTTGGTTTACTTAGCCTTATCTCGCAATTATTTCGAAGGTGTTTTGCCTGCAAGCCTTTCAGGTAGTTCAATAGAGACACTATTGGTGAATGGACAGAATAGTAAGTCTAAACTCAATGGTACCCTTGAGGTGTTGAAGAATATGACATCCTTGAAGCAAATTTGGGCCCATGGTAATTCATTCACAGGTCCTATACCTGATTTGTCACACCATGACCAACTTTTTGATGTGAGTTTGAGGGATAACCAGTTAACTGGTGTTATTCCACCCTCTCTTATGGCTCTTCCAAGTCTTAAGGTTGTAAGTTTGACCAATAATCATTTTCAAGGGTCCCCTCCTCTGTTCAAAAATGGGGTAAGAGTTGATAATAATATGGATAATGGGAGAAATCAGTTTTGCACAAAGATCCCGGGGGAGCCTTGTAGTCCCTTAGTGAATGCTTTACTATCTGTTATTGAACCTTTGGGGTATCCTCTCAAGTTTTCTCAAAGTTGGGAAGGTAATGATCCATGTGCTAATCAATGGACTGGGATAATTTGTTCCGGTGGAAACATTTCGGTTATAAACTTTCAGAACATGGGCTTGTCTGGCTCTATTTCTCCTAGTTTTGCTAGACTTACATCTGTGACAAAGCTACTTCTTGCTAACAATTATATCACTGGTACCATACCAAATGAACTTACTAGCATGCCTTTTCTTCAAGAGTTAGATGTTTCGAATAATAACTTATATGGTCGAGTACCACCTTTTCGCGACGGTGTGGTTCTTGAATTTGATGGCAATCCTGATATTGGAAAAGATAAACCTACTTCTAGCCTTGGAGGTGGTGATAAAAAGAATGATGCTGGAATCATTATTGGAATTATGATAGGGCTTGTTATTTTACCTGCTATAGGGATACTAATATTTATGAAGTACAGAAGAAAATTGAACCCGAAAGGAAAAGTTCAAAATCCAACTGCAGTAGTAGTACATCCTCGCTATTCTGCAGATGGTAATGATGCTATTAAGATAAGTGTTGTTGGTGGAGGAACTGGTGCATTAAGTCCGACGAGTAATGTTTACCCGATGGAAGCTGGTAACATGGCGATTTCGGTTCAAGTTTTAAGAGACGTTACCAATAATTTTAGTGAAGAAAACATACTAGGGAAAGGGGGTTTTGGAACTGTATACAAAGGAGAATTGCATGATGGGACAAAGATTGCAGTGAAAAGGATGCAATCAGGAACTATGGGAGAGAAAGGACTGAGTGAGTTCATGGCTGAAATTGCAGTACTTACTAGGGTGAGACACAAGCATTTGGTTGCACTATTGGGGTATTGCTTGGATGGTAATGAGAGACTTCTTGTTTATGAATACATGCCTCAAGGTGCTCTTAGTAGATTATTGTTCCATTGGAAAAAGGAAGGGCTAAAACCACTTGAATGGAAGACAAGGCTTACTATTGCGTTGGATGTTGCTAGAGGTGTCGAATATCTTCATGATTTGACCCAACAAACTTTTATCCATAGGGATCTCAAACCATCCAACATTTTGCTTGGTGATGATTTGAGGGCTAAAGTATCAGACTTTGGATTGGTTAGGCTAGCTCCAGAAGGAAAAGCTTCATTTCAAACAAGGCTTGCCGGGACTTTTGGATATCTAGCACCAGAGTATGCAGCCACTGGACGACTTACAACAAAGGTTGATGTGTATAGTTTTGGAGTGATCCTTATGGAGATGATAACGGGGAGAAGAGCACTCGATGAAAGTCGATCTGAAGAGAACTTCCACCTTGTTTCATGGTTCTGCAGGATGCTATTGAACAAAGATTCGTTCGTAACAATCATCGATCCAACAATCGATATCGATGATGAGGAAACCTTAGCCACCATTAGCACTGTTGCAGACTTGGCAGGTCACTGCTGTTCAAGAGAGCCTTACCAGCGTCCCGATATGAGTCATGCCGTGAGTGTTCTATCACCTATTGTTGAGATTTGGAAGCCTACAGAAGCAGATGTTGATGACATATTTGGTGTCAACTTTGATATGACACTACCACAAGCACTCAAAAGGTGGCAAGATTTTGAAGGAAACAGTAATTTGGATACTACTTATCCTTTTTCATCAGTGAATACTGATACTAATGGATACAACACAAAATCAAGCATTCCCCTTTAG 2730 0.3978 MEKPQMGFGVSSLYCFVLVLSVIVITARGQDYEVMIMLKRMIINAPNTLQWTDPDVCKWNHIQCDKRNRVIAIQIGNQTLQGSLPKELENLSQLTRFECQGNNFTGAFPYLSKSLQKLLIHGNMFSSFPNDFFMAMSNLEEVRLDENPFPQWMVPNSLKDCLALQSFSAQSVGFVGTIPDFFGNGGPFPGLVYLALSRNYFEGVLPASLSGSSIETLLVNGQNSKSKLNGTLEVLKNMTSLKQIWAHGNSFTGPIPDLSHHDQLFDVSLRDNQLTGVIPPSLMALPSLKVVSLTNNHFQGSPPLFKNGVRVDNNMDNGRNQFCTKIPGEPCSPLVNALLSVIEPLGYPLKFSQSWEGNDPCANQWTGIICSGGNISVINFQNMGLSGSISPSFARLTSVTKLLLANNYITGTIPNELTSMPFLQELDVSNNNLYGRVPPFRDGVVLEFDGNPDIGKDKPTSSLGGGDKKNDAGIIIGIMIGLVILPAIGILIFMKYRRKLNPKGKVQNPTAVVVHPRYSADGNDAIKISVVGGGTGALSPTSNVYPMEAGNMAISVQVLRDVTNNFSEENILGKGGFGTVYKGELHDGTKIAVKRMQSGTMGEKGLSEFMAEIAVLTRVRHKHLVALLGYCLDGNERLLVYEYMPQGALSRLLFHWKKEGLKPLEWKTRLTIALDVARGVEYLHDLTQQTFIHRDLKPSNILLGDDLRAKVSDFGLVRLAPEGKASFQTRLAGTFGYLAPEYAATGRLTTKVDVYSFGVILMEMITGRRALDESRSEENFHLVSWFCRMLLNKDSFVTIIDPTIDIDDEETLATISTVADLAGHCCSREPYQRPDMSHAVSVLSPIVEIWKPTEADVDDIFGVNFDMTLPQALKRWQDFEGNSNLDTTYPFSSVNTDTNGYNTKSSIPL 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0674 909 Gene3D Transferase(Phosphotransferase) domain 1 644 861 - -
Lal23g0674 909 Gene3D Ribonuclease Inhibitor 334 458 IPR032675 -
Lal23g0674 909 Pfam Protein kinase domain 567 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0674 909 SUPERFAMILY L domain-like 42 307 - -
Lal23g0674 909 SUPERFAMILY Protein kinase-like (PK-like) 542 852 IPR011009 -
Lal23g0674 909 PANTHER OSJNBA0070M12.3 PROTEIN 6 908 - -
Lal23g0674 909 CDD STKc_IRAK 572 846 - -
Lal23g0674 909 SMART serkin_6 566 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0674 909 ProSitePatterns Protein kinases ATP-binding region signature. 572 594 IPR017441 GO:0005524
Lal23g0674 909 Pfam Leucine rich repeat N-terminal domain 336 371 IPR013210 -
Lal23g0674 909 Pfam Leucine rich repeat N-terminal domain 30 65 IPR013210 -
Lal23g0674 909 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 6 908 - -
Lal23g0674 909 ProSitePatterns Serine/Threonine protein kinases active-site signature. 691 703 IPR008271 GO:0004672|GO:0006468
Lal23g0674 909 Gene3D Phosphorylase Kinase; domain 1 537 643 - -
Lal23g0674 909 SUPERFAMILY L domain-like 336 439 - -
Lal23g0674 909 Gene3D Ribonuclease Inhibitor 29 329 IPR032675 -
Lal23g0674 909 ProSiteProfiles Protein kinase domain profile. 566 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0674 Lal-Chr23 9409469 9413171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0674 70 846 Receptor kinase-like Gene Family AT5G07280 29.808 4.00e-80 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lal23g0674 Pkinase 3.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0674 - K00924 gmx:100788903 1263.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0674 23 9409469 9413171 Lal23g0674 23 9409469 9413171 ECH
Lal15g0943 15 7307008 7310386 Lal23g0674 23 9409469 9413171 LSH