Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal23g0640 | ATGTCCACTTCAAAGAGCCTTAGCAATTGTAGTGAAGATGATAATGAACTTAGAAGAGGACCTTGGACTCTTGAAGAAGATAAGTTGCTTGTTCAGTACATTTCTGATCATGGTGAAGGGAGATGGAATTTACTTGCTAAACGTTCAGGTTTAAAGAGAATAGGAAAAAGTTGCAGATTAAGGTGGCTAAATTATCTAAAACCTGATGTAAAACGAGGAAATTTAACCTTTGAAGAACAGCTTTTGATTCTTGAACTCCACTCAAGGTGGGGAAACAGGTGGTCAAAAATTGCACAACATTTGCCGGGTAGGACAGACAATGAAATAAAAAACTATTGGAGGACCAGGATTCAAAAACAAGCAAGACATTTAAAAATTGACACATATAGCATAGAATTTCAAGAACTTGTTAGGCATTTCTGGATACCAAAGTTGCTTCAGAAAGCAAAAGAGTCATCTCCATCCATGTCAATCCAAAACCAAACAATTCCTATGCCACTTGGTAGTGGTCCTCAATATTCAGCCATAGCAACACAAATCCCTTGGCAGGGACCTTGTATCAATGAAGCAACTACAGGTCCTAATTATTTGGATCAACATGATCAGAACTCTGATTCTGAGCACAACAATGGTTCATGCATCTCATTTTCTGAATCAGTAAATATCTCAAAAGTGCCTAACCTTTTGGGATACACAACAAATCAATTTTATGGCTTAGGTACCAATGACTTTGGCACACTCACTTATGATGGCTATGATGTAAATAACAATGCATATGAGATGGATGCCTTCAACATGGCAACTACAATTGGTGATTGCCACATGGTAGAAAGCAATTGGGTAAACAAAGATTTTCTTGCATGTAGAACATGGAACATGGATGAATTATTTTAA | 894 | 0.3714 | MSTSKSLSNCSEDDNELRRGPWTLEEDKLLVQYISDHGEGRWNLLAKRSGLKRIGKSCRLRWLNYLKPDVKRGNLTFEEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRIQKQARHLKIDTYSIEFQELVRHFWIPKLLQKAKESSPSMSIQNQTIPMPLGSGPQYSAIATQIPWQGPCINEATTGPNYLDQHDQNSDSEHNNGSCISFSESVNISKVPNLLGYTTNQFYGLGTNDFGTLTYDGYDVNNNAYEMDAFNMATTIGDCHMVESNWVNKDFLACRTWNMDELF | 297 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal23g0640 | 297 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 14 | 70 | IPR017930 | - | |
Lal23g0640 | 297 | ProSiteProfiles | Myb-like domain profile. | 67 | 117 | IPR001005 | - | |
Lal23g0640 | 297 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 71 | 121 | IPR017930 | - | |
Lal23g0640 | 297 | PANTHER | MYB TRANSCRIPTION FACTOR-RELATED-RELATED | 8 | 295 | IPR044676 | GO:0003700|GO:0006355|GO:0043565 | |
Lal23g0640 | 297 | SUPERFAMILY | Homeodomain-like | 17 | 113 | IPR009057 | - | |
Lal23g0640 | 297 | Pfam | Myb-like DNA-binding domain | 19 | 66 | IPR001005 | - | |
Lal23g0640 | 297 | Pfam | Myb-like DNA-binding domain | 72 | 115 | IPR001005 | - | |
Lal23g0640 | 297 | CDD | SANT | 76 | 115 | IPR001005 | - | |
Lal23g0640 | 297 | ProSiteProfiles | Myb-like domain profile. | 14 | 66 | IPR001005 | - | |
Lal23g0640 | 297 | SMART | sant | 71 | 119 | IPR001005 | - | |
Lal23g0640 | 297 | SMART | sant | 18 | 68 | IPR001005 | - | |
Lal23g0640 | 297 | Gene3D | - | 19 | 71 | - | - | |
Lal23g0640 | 297 | Gene3D | - | 76 | 118 | - | - | |
Lal23g0640 | 297 | PANTHER | OS01G0128000 PROTEIN | 8 | 295 | - | - | |
Lal23g0640 | 297 | CDD | SANT | 21 | 66 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal23g0640 | Lal-Chr23 | 9135162 | 9137027 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal23g0640 | 14 | 203 | MYB Transcription Factor Family | AT1G68320 | 55.556 | 1.45e-73 | 226 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Lal23g0640 | Myb_DNA-binding | 3.7e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal23g0640 | K09422 | - | gmx:778045 | 467.233 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal23g0640 | 23 | 9135162 | 9137027 | Lal23g0640 | 23 | 9135162 | 9137027 | ECH | |
Lal16g1010 | 16 | 6718001 | 6719884 | Lal23g0640 | 23 | 9135162 | 9137027 | LSH |