Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0631 ATGGCAAGTCGATTGAAGGAAGATGAGAAAAATGAAAGAATCATTCGAGGTCTTCTCAAACTTACACCGAATCGTAGGTGTATCAATTGTCACAGCTTGGGACCACAATATGTGTGCACAAATTTCTGGATGTTTGTTTGCACAAACTGCAGTGGAATACACCGAGAATTTACACATCGAGTAAAATCAGTTTCGATGGCTAAATTTACTTCTCAAGAAGTTAGTGCACTTCAGGAAGGAGGAAATCAGCGTGCAAGAGAAATTTATTTTAAAGAATGGGATCCACAACAACAGTCTTTGCCCGATAGCAGTAATGTTGACAGACTCCGGGACTTTATTAAGCATGTTTATGTGGATAGAAAATTCACTGGTGAAAGGGCCTACGACAAACCTCCGAGAGTAAAGACGGGCGAGAAAGATGATTTATATGAAAACAGGAGGACGGAGACATATCAGGGAGGACCTAAAAGCCCTCAATATGAGGACACATATGAACGTCGTTATAGTGATAGGTCTAGTCCTGGTGGAAGAAGTCCTGGTGGAAGAAGTCCTGGCGGAAGAAGTCCTGGATATGATCAGGAAAGTAGACAATATGGTGATTTTAGAAGAAGCGCTGGTCCTCCTCCAGTAGTCAATGACTGGCGTCGTGAAGATAGATTCAGAGATGAAAGGAAATTTGAAGATCATATAATATCTGATGGAGATATTAAGATGGACAGCCAATCCCTTGAGCGAGCCAAAGATCTTGGTTCTTCAAGTCTACCTGTGGTCCGACCTGTTAGAGATATTTTGGGAGAAAATGTTGTTCCTCTTCGAATCAGTGAACCCCCTAAAACAAACATTGGAAAGGCTGTTAACGGCTCATTGCTAACACAGAGAACTGCATCTTCCAGTAGCTTGGCATCCAGCAATGGAAACCTTGCGGAAGTTAAGCTTGAGAGTACTAAGAGCCTTATTGATTTTGATGATGATCCTGAACCGCCTCTGGCTCCGCAACCTGTTGTGATGCCAGAAAATTCCGGTGATAGCAATTGGGCCTGCTTTGATTTTGCTCCTGAGGCAAAAGCAGCTCAGGGTTCTTCAAATGCAAATCCACTTGAACCTATGTTATCTCAATTGTCCGTACCAGCAGCTTTACCTGGTCATGTGTCTGGAGCTCCAGGTGGTCCTCATCATGCAGCAGCTATTCCTATGAGCAGTGTGCCTGTGACAGGATCAGTTCTTATTGCTGCGGGAGCTCCAACTATTAATAGCTTTTCAGCATTCCCTCCCAGTGGTGCTTCAGTAACATATCCTGGATCGGCAACAGTATCACCACTCAATAATGCGGGACAGTTGGCTGGTTTACTGTATCAGCAACCTTCGTTCCCTGGAACTGTTAGTCATCAACCTACTATTCAACAATGTACACCACCAGTAGATGGTGCTTCGAAGAATAAGCCCTGGAATATACCTTCTGTACCGACAGTACAGGGGCATTCTAGCACACCAATGCCACATGCATTCCATCATGCCAATGAGGCTAATTCCAATGTTGTTTCACAACCTTCTAATATAGACATAAAACCAAATGGAAGAACTGAACTTCCAGAGGATCTATTCACTGTAAAATATTCACCCTTCCCTGGTCCAGCTCCAGGCTGGCAAATGGGTGCACCCCTTGGCATGGGTACTTCAATTCAATATAATAACACAGTGGTACCGTTACAGCCTATTCGAAGTTTTCCGCAACCATCAAAATCATCAAATCCATTTGATGTTAGCAATGAACCAACTCCAGTTCAAGCCGCATCATTTCCTTCCATGTCATCTTTGGAAGGTGTTCTTCCTAGTGTAACAACTTCAGGAACAGTGCACCCTTCAAGCCTGGGTAATACATCTTTTGCCTGGAATCCACCCTTATCATCATCATATGTATCAGTGCTGCCTCCTCAAGCACAAACTCTTGTACTGGCCGTGGCACCAGGGGCATACATGGGGCAACAAATGCCAACCAACACGTCAATGCCTAGGTATCAAGGAATTCAGAGTTTTGGTGCTGATGGTGCTGCTTTTGGCATCTCAAATCCAGATCAGCAGTTGAATGGTAGGTTGTCAATCCCTACAACCCCAAACCCCTTCCCTGCCGCAGGGAACCCATTCGGATGA 2148 0.4441 MASRLKEDEKNERIIRGLLKLTPNRRCINCHSLGPQYVCTNFWMFVCTNCSGIHREFTHRVKSVSMAKFTSQEVSALQEGGNQRAREIYFKEWDPQQQSLPDSSNVDRLRDFIKHVYVDRKFTGERAYDKPPRVKTGEKDDLYENRRTETYQGGPKSPQYEDTYERRYSDRSSPGGRSPGGRSPGGRSPGYDQESRQYGDFRRSAGPPPVVNDWRREDRFRDERKFEDHIISDGDIKMDSQSLERAKDLGSSSLPVVRPVRDILGENVVPLRISEPPKTNIGKAVNGSLLTQRTASSSSLASSNGNLAEVKLESTKSLIDFDDDPEPPLAPQPVVMPENSGDSNWACFDFAPEAKAAQGSSNANPLEPMLSQLSVPAALPGHVSGAPGGPHHAAAIPMSSVPVTGSVLIAAGAPTINSFSAFPPSGASVTYPGSATVSPLNNAGQLAGLLYQQPSFPGTVSHQPTIQQCTPPVDGASKNKPWNIPSVPTVQGHSSTPMPHAFHHANEANSNVVSQPSNIDIKPNGRTELPEDLFTVKYSPFPGPAPGWQMGAPLGMGTSIQYNNTVVPLQPIRSFPQPSKSSNPFDVSNEPTPVQAASFPSMSSLEGVLPSVTTSGTVHPSSLGNTSFAWNPPLSSSYVSVLPPQAQTLVLAVAPGAYMGQQMPTNTSMPRYQGIQSFGADGAAFGISNPDQQLNGRLSIPTTPNPFPAAGNPFG 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0631 715 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Lal23g0631 715 CDD ArfGap_AGFG 12 122 - -
Lal23g0631 715 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Lal23g0631 715 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Lal23g0631 715 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Lal23g0631 715 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Lal23g0631 715 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Lal23g0631 715 PANTHER ARFGAP/RECO-RELATED 1 715 IPR044820 GO:0005096
Lal23g0631 715 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Lal23g0631 715 MobiDBLite consensus disorder prediction 128 147 - -
Lal23g0631 715 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Lal23g0631 715 PANTHER ARF GTPASE ACTIVATOR 1 715 - -
Lal23g0631 715 MobiDBLite consensus disorder prediction 577 597 - -
Lal23g0631 715 MobiDBLite consensus disorder prediction 128 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0631 Lal-Chr23 9044226 9051409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0631 12 122 C2H2 Transcription Factor Family AT4G21160 34.188 2.68e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0631 - - gmx:100781002 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0631 23 9044226 9051409 Lal23g0631 23 9044226 9051409 ECH
Lal16g1030 16 6872642 6879416 Lal23g0631 23 9044226 9051409 LSH