Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0627 ATGGAAAACCAAAACCGTCTCAAACTCAAAATCTCTCGCATGTTTCGTTCTTCATTTGGATCCTGCCGTACCAGAAACTTCACCGACGTAATGGAAAAAGCAGTGTTTTCCCCACCAAAAAACCACAACCATGAAACCTTACAGTTCCACCAACTTCTAGTGGATCCAACCTCCCCAAAACCACGATCATTTCCCTCTATTTGTAAACCTAAAGTGTCTCAAACATCTCAAGCCATAAACGACCAATGCATCATGTCGTTTCAGGATTCACTTCCTAGACGCAAAATCTCAGAATGTTTATCACCCTTTGCAAACAACCCCATTGCTTCACTAAGCATACCCTTCAATGACACTGTTTTTTTCTTTGAAGAAGAAACTAAAAAGTCAGATAGAAACAAAAGGAATAAGAAAAAGAAGAAGAAGAAGAATGCCCAGAGGAGAAGAGAGATTTTCCCATTTAACTCTTGCGCTAAAGACACAAACTTTGGTGACTATTATTGCTTTAGTAGCGACGAAGATGATGAAACAGACACGTTTTTCTCCTCAAAGAGCCTCTCTTCTGATTCCTCAAGGTCTCGCCGCCGACGCCGGAAAAATAACTCCGGCCACCGGAAGAAATGTCAGGGATCTGAAATGGGTGTTCTTCCGTTGCACAGGAATGGGAAGGTGGAGGACACGCTCGCGGTGGTGAAGCGTTCAAGTGATCCGTACAGTGATTTCAGGACTTCAATGTTGGAGATGATAGTTGAGAAGCATATATTCTCACCACTAGATTTGGAGAATCTGTTGCAGTGTTTTTTGTCTCTGAATTCTTGTCATCATCATAAGATCATTGTTGAAGTTTTCACTGAGATTTGGGAAGCTTTGTTCTCTGACTGGCTTTGA 885 0.4192 MENQNRLKLKISRMFRSSFGSCRTRNFTDVMEKAVFSPPKNHNHETLQFHQLLVDPTSPKPRSFPSICKPKVSQTSQAINDQCIMSFQDSLPRRKISECLSPFANNPIASLSIPFNDTVFFFEEETKKSDRNKRNKKKKKKKNAQRRREIFPFNSCAKDTNFGDYYCFSSDEDDETDTFFSSKSLSSDSSRSRRRRRKNNSGHRKKCQGSEMGVLPLHRNGKVEDTLAVVKRSSDPYSDFRTSMLEMIVEKHIFSPLDLENLLQCFLSLNSCHHHKIIVEVFTEIWEALFSDWL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0627 294 ProSiteProfiles OVATE domain profile. 229 288 IPR006458 -
Lal23g0627 294 PANTHER OVATE PROTEIN FAMILY-RELATED 7 294 - -
Lal23g0627 294 MobiDBLite consensus disorder prediction 175 208 - -
Lal23g0627 294 MobiDBLite consensus disorder prediction 126 145 - -
Lal23g0627 294 Pfam Transcriptional repressor, ovate 233 290 IPR006458 -
Lal23g0627 294 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 294 IPR038933 GO:0045892
Lal23g0627 294 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 228 290 IPR006458 -
Lal23g0627 294 Coils Coil 127 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0627 Lal-Chr23 8999804 9000688 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lal23g0627 Ovate 5.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0627 - - adu:107478678 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0627 23 8999804 9000688 Lal23g0627 23 8999804 9000688 ECH
Lal16g1046 16 6969605 6970495 Lal23g0627 23 8999804 9000688 LSH