Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0622 ATGCCATCTCTATGCATCTTCACACCATTCCCTTCACTTCAAAACCCTAACTTTCACCATACCCACTTCTTCAATTCCCCTTTCACTTCTCACCTTCACTTCTCCCACACCAAGATTCTTTGCAACGCTTTAAAGGATTCCAGTGAAGACATAAAAGCTGTTTTCGGATCTAACGGTGGTGGTGGTGACGGAGGAGGTAGTGGTGGTGACGGTGGTAACGATGGTGATGGTGACCGGAGTAAGAAGGTGGAGAAGAAAGAAGGGCCTTTGCCAGATTGGTTGAATTTCACTTCTGATGATGCAAAAACGGTTTTTGCTGCTTTGGCTATATCGCTTGCGTTTCGTACGTTTGTGGCTGAGCCTAGGTACATTCCATCGTTGTCAATGTATCCTACATTTGATGTTGGAGATCGACTTGTTGCTGAAAAGGTTTCATACTACTTTAGAAAGCCATGCGCAAATGACATAGTGATATTTAAAAGCCCTCCAGTCCTTCAGGAAGTTGGATATACAAATGATGATGTTTTTATAAAACGTGTGGTTGCGAAGGAAGGTGATATTGTGGAGGTTCGCAAAGGGCATCTTATTGTTAATGGGGTTGAGAGGAATGAAAAGTTCATCTTTGAGGCACCTTCTTATGAGATGGAACCTACACGTGTACCGGAGAACTATGTTTTTGTGATGGGAGACAACCGCAATAACAGCTATGATTCTCATGTGTGGGGTCCCCTTCCAGCCAAGAACATTATAGGTAGGTCGGTATTCCGCTATTGGCCGCCAAATAGAATTGCTAGCACAATTTCTAAGGAAGGATGTGCTGTTGAAAGCAAGCAGGAGAGTACTCTACCATCTCAATGA 858 0.4371 MPSLCIFTPFPSLQNPNFHHTHFFNSPFTSHLHFSHTKILCNALKDSSEDIKAVFGSNGGGGDGGGSGGDGGNDGDGDRSKKVEKKEGPLPDWLNFTSDDAKTVFAALAISLAFRTFVAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTNDDVFIKRVVAKEGDIVEVRKGHLIVNGVERNEKFIFEAPSYEMEPTRVPENYVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPNRIASTISKEGCAVESKQESTLPSQ 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0622 285 Pfam Signal peptidase, peptidase S26 101 258 IPR019533 GO:0004252|GO:0006465
Lal23g0622 285 ProSitePatterns Signal peptidases I serine active site. 126 133 IPR019756 GO:0004252|GO:0016021
Lal23g0622 285 SUPERFAMILY LexA/Signal peptidase 115 265 IPR036286 -
Lal23g0622 285 CDD S26_SPase_I 120 252 IPR019533 GO:0004252|GO:0006465
Lal23g0622 285 Gene3D Umud Fragment, subunit A 114 272 - -
Lal23g0622 285 PRINTS Bacterial leader peptidase 1 (S26A) family signature 117 133 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lal23g0622 285 PRINTS Bacterial leader peptidase 1 (S26A) family signature 176 188 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lal23g0622 285 PRINTS Bacterial leader peptidase 1 (S26A) family signature 220 239 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lal23g0622 285 MobiDBLite consensus disorder prediction 55 86 - -
Lal23g0622 285 PANTHER SIGNAL PEPTIDASE I 80 269 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lal23g0622 285 ProSitePatterns Signal peptidases I signature 3. 225 238 IPR019758 GO:0004252|GO:0016021
Lal23g0622 285 TIGRFAM sigpep_I_bact: signal peptidase I 102 260 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lal23g0622 285 PANTHER THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED 80 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0622 Lal-Chr23 8949918 8954571 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0622 129 259 MADS-box Gene Family AT1G29960 33.083 1.27e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0622 K03100 - gmx:100815810 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0622 23 8949918 8954571 Lal23g0622 23 8949918 8954571 ECH