Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0616 ATGGATTGCAGATATGACTGTGGAGAAACTCAAAGGAATAAGTGTGCAGCATGCTTCAGACAATTCAACAAACTTGAGCACCTTGTGGAGCACATGAGGATCTCATATCATTCGGTTCATGAACCAACCTGTGGCATTTGTAGAAAACACTGCAGGTCATTTGAGTCTCTAAGGGAACATCTTATAGGTCCCTTGCCAAAACAAGAATGCAAAGATATTTTTGCTTACCGAGGGTGCAATATTTGCTTGAAAGTCTTTGACAGCCCTAACTCTCGCTGGATCCACCAAGAAAAATGCCAATTAACAAATACTGGAATAATTGGTCGATTTTCAAACATGGGCATTCGTGATAATTTGACTATTGGTTGTGGAGCAAGAGGACCCCAAGTAGTTGCACTTGCATGTAAAATGGTTGGTGGTGGCAGTGATGGCTCACTGGATCTCTGTGCAAGAGTCTGCATGACCGATGAACATGATAATATCATCTTCCATTCTTATGTCAAGCCACCAATTCCTGTCACAAACTATAGGTATGAGACAACAGGCATTAGACCAGAATACCTGAGGGATGCAATGCCAATGAGGCAGGTTCAGAAGAGGATTCAAGACTTTCTTTGCAATGGAGAATCAATGTGGACAATTAGAGCAAGGGGAGGAAAAGCTAGGACCCTTGTGGGTCATGGTTTGGATCATGATCTAGAATGTTTGCAAATAGAGTATCGAGCAGAAAAAATTAGGGACACTGCAAAGTACCCTCCACTGATGAAAACGAGCAAGCTGAGCAACTCATTGAAGTACTTAACACAAGCATATCTCGGGTATGAAATTCAAAATGGGATACAAGATCCTTATGATGATTGTGTTGCAACAATGAGGCTCTACATGAGAATGAGATCCCAAGTACATAAAATAGAAGATAACCCTTTGGCATCTGACACAAGGAATAGGAATAATTTTGCTTCTTGGAGGCAAAGTGAGCTTGAAAAAATGTCTTCTGAACAAATGTTGGAGATCTCAAGATCTGACTTCTATTGCTGGTGCTTGGATTCATAG 1053 0.4112 MDCRYDCGETQRNKCAACFRQFNKLEHLVEHMRISYHSVHEPTCGICRKHCRSFESLREHLIGPLPKQECKDIFAYRGCNICLKVFDSPNSRWIHQEKCQLTNTGIIGRFSNMGIRDNLTIGCGARGPQVVALACKMVGGGSDGSLDLCARVCMTDEHDNIIFHSYVKPPIPVTNYRYETTGIRPEYLRDAMPMRQVQKRIQDFLCNGESMWTIRARGGKARTLVGHGLDHDLECLQIEYRAEKIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYEIQNGIQDPYDDCVATMRLYMRMRSQVHKIEDNPLASDTRNRNNFASWRQSELEKMSSEQMLEISRSDFYCWCLDS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0616 350 SUPERFAMILY Ribonuclease H-like 143 300 IPR012337 -
Lal23g0616 350 ProSiteProfiles Zinc finger C2H2 type domain profile. 13 42 IPR013087 -
Lal23g0616 350 ProSitePatterns Zinc finger C2H2 type domain signature. 15 37 IPR013087 -
Lal23g0616 350 SMART exoiiiendus 129 303 IPR013520 -
Lal23g0616 350 CDD REX4_like 131 294 IPR037431 GO:0006364|GO:0008408
Lal23g0616 350 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 7 350 - -
Lal23g0616 350 PANTHER OS02G0709000 PROTEIN 7 350 - -
Lal23g0616 350 Pfam Exonuclease 149 294 IPR013520 -
Lal23g0616 350 Gene3D - 127 317 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0616 Lal-Chr23 8896705 8899822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0616 6 350 C2H2 Transcription Factor Family AT3G27970 72.989 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0616 - - gmx:100813973 654.825