Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0611 ATGCTGAGAGTAATTCCATTACCAATGGCTTCTTCTGTTCGACCCGCTCTCACTCTCTCTTCTTTTCCCTTCTCATCTCATTCCTCACGCTCTCGCTCTCTCTTCAATCTTCCAAGAACTGCAGTTTCACAATCCCATAGTTTTGGCCTCAAAGCAGCAAGGCTGTTCAGACAAGATGCTACTCGCATGAGAGTGATGGCAACCGGGAATGTGTCACAAGCAAGTACAGCTGCTTCATCGGAAAATGTACTAGAATGGGTCAAACAGGATAAGCGAAGATTGCTCCATGTTGTATATCGCGTTGGGGATTTGGACAGGACCATAAAATTTTATACAGAGTGCCTGGGAATGAAGCTCCTTAGGAAGCGTGACATACCAGAGGAGAGATATACCAATGCCTTCCTTGGATATGGGCCTGAAGATTCACATTTCGTTATTGAACTGACATACAATTATGGAGTTGACAAGTATGATATTGGATCTGGATTTGGCCATTTTGGTATTGCTGTTGATGATATTGCAAAAACAGTGGAATTAATAAGAGCCAAGGGTGGCAAAATAACCAGAGAGCCTGGTCCTGTCAAAGGAGGCAACACAGTAATTGCATTTATTGAAGATCCGGATGGTTACAAATTTGAACTTTTGGAAAGAGGTCCTTCTCCTGAACCTTTGTGCCAAGTAATGCTTCGGGTGGGCGACCTTAATCGTTCTATAGCTTTTTATGAGAAGGCTTTTGGTATGGAGCTGCTTCGCACACGAGATAATCCAGAGTACAAGTATACTATAGCAATGCTGGGTTATGGTCCAGAAGATAAAAGTGCTGTTCTGGAGTTGACTTACAATTATGGAGTCACGGAATATGATAAAGGAAATGCATATGCTCAGATTGCAATAGGCACAGATGATGTATACAAAACTGCAGAAGTGATTAAACTAGCTGGAGTGGGTGGAAAGATTACTCGGGAACCTGGACCAATACCTGGTATCAGCACAAAAATTACAGCATGCTTGGATCCTGATGGTTGGAAGACGGTTTTTGTAGATAATGTTGATTTTCTCAAGGAGTTGGAGTAG 1074 0.4255 MLRVIPLPMASSVRPALTLSSFPFSSHSSRSRSLFNLPRTAVSQSHSFGLKAARLFRQDATRMRVMATGNVSQASTAASSENVLEWVKQDKRRLLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGSGFGHFGIAVDDIAKTVELIRAKGGKITREPGPVKGGNTVIAFIEDPDGYKFELLERGPSPEPLCQVMLRVGDLNRSIAFYEKAFGMELLRTRDNPEYKYTIAMLGYGPEDKSAVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEVIKLAGVGGKITREPGPIPGISTKITACLDPDGWKTVFVDNVDFLKELE 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0611 357 ProSitePatterns Glyoxalase I signature 1. 96 117 IPR018146 GO:0004462|GO:0046872
Lal23g0611 357 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 93 217 IPR037523 -
Lal23g0611 357 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 94 214 IPR004360 -
Lal23g0611 357 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 226 343 IPR004360 -
Lal23g0611 357 CDD GlxI_Ni 94 215 - -
Lal23g0611 357 Gene3D - 220 357 IPR029068 -
Lal23g0611 357 PANTHER LACTOYLGLUTATHIONE LYASE 22 357 - -
Lal23g0611 357 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 92 222 IPR029068 -
Lal23g0611 357 TIGRFAM glyox_I: lactoylglutathione lyase 224 349 IPR004361 GO:0004462|GO:0046872
Lal23g0611 357 TIGRFAM glyox_I: lactoylglutathione lyase 79 226 IPR004361 GO:0004462|GO:0046872
Lal23g0611 357 ProSitePatterns Glyoxalase I signature 1. 226 247 IPR018146 GO:0004462|GO:0046872
Lal23g0611 357 Gene3D - 63 218 IPR029068 -
Lal23g0611 357 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 223 349 IPR037523 -
Lal23g0611 357 PANTHER LACTOYLGLUTATHIONE LYASE, CHLOROPLASTIC-RELATED 22 357 - -
Lal23g0611 357 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 224 349 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0611 Lal-Chr23 8868784 8877364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0611 226 346 Calmodulin-binding Proteins AT1G08110 29.252 4.39e-10 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0611 23 8868784 8877364 Lal23g0611 23 8868784 8877364 ECH
Lal23g0611 23 8868784 8877364 Lal10g1023 10 17388333 17392566 PCT
Lal10g1023 10 17388333 17392566 Lal23g0611 23 8868784 8877364 PCT