Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0592 ATGGATGAAGAAATGAACATGAATCATGAAACACCAGAGGGAGTAGATGGCTGTAATGGTAGTGAAGATGAAAATGTGAATGAAATAGAGGAGTTAGATTTTGAAGAGATTGATTTTCGATTACTAAATGAAGATGAAGTGAAGAAATATCAGTTTTTAAACAGTGAAATTACATACAAATTTTATAAGATGTATGGTATGAAGAAAGAATTTGGCATTAGAAAATATCATAATCGACGAGACAAGGATGGTGAAATTTTGTGGCAATCCTTTTTTTGTGATAGAGAAGGATTTAGAGATAAAAAAAATGATTTGATTCGGAAGAGGGCGCCGAGAAAAGAGACTAGATGTGGTTGTTTAGCAAGAATGAAAATCCACATCGACAAGGAGAAAGGAGATTGGTATGTTAGTTATTTTGTTGATGAACATAATCATGAACTCGTTGATGAACATTATGGTGCGATGATAGCCTTTAACCGAAGAATGATAGAGACAGATGTGGCTCAGATGAACACAATGAGAGAAGTGGATGGATGTAGCATTTTCGACTACTCAATTTTTGGAGATGTTCTTGCATTTGATGCAACTTATAGTCGAAACAATTATAAGTTTCCAGTTGTTATATTTTCTGGTGTTAATCATCATAAACAAACAACTGTGTTTGCTACTGTTGTTGTGTCAAATGAGACAGATGAAACATACGTATGGCTTTTGGAGAAATTTTTTGAGGCAATGAATGGGAAACATCCAAAGTTTGTTATAACTGATGGTGATTTGTCCATGAAGAATGCAATTAGAAGAGTTTTTCCCGAAGTCCATCATAGATGGACAAAGAAAGCAAAGGATGTTCAGCGTCTCAATTTTCAGCAATGCGACCTAAGTAAAGAATCAGTTGAAAGTAGTAGATATAGAGCTTTGAGTGATGGTTGTAGAGTGTTATGTAACTTTGCTTGCAAAACGGAGGAGGATTTTACTGAGATGTTGGAAAAAATATATAATGAATGTAGTAGACTGCGATTGAAACAACAGTCCAGTGAAACGGAAAATGTTGAAAATGTTACTGAAGAGCAAGTACGAGATCCAATTCGAGTGCGTGCTAAAGGGCGAGCACCTGGGATGACCACAAAAGGTAAGCGGGGACATCAGTGCAGTATTTGTCGTGAAATTGGACACAATAGAGCAAGTTGTCCAAATGTTGTTGATAGTTGTAGTCGTATTTTCGATGAGGAATAA 1233 0.3585 MDEEMNMNHETPEGVDGCNGSEDENVNEIEELDFEEIDFRLLNEDEVKKYQFLNSEITYKFYKMYGMKKEFGIRKYHNRRDKDGEILWQSFFCDREGFRDKKNDLIRKRAPRKETRCGCLARMKIHIDKEKGDWYVSYFVDEHNHELVDEHYGAMIAFNRRMIETDVAQMNTMREVDGCSIFDYSIFGDVLAFDATYSRNNYKFPVVIFSGVNHHKQTTVFATVVVSNETDETYVWLLEKFFEAMNGKHPKFVITDGDLSMKNAIRRVFPEVHHRWTKKAKDVQRLNFQQCDLSKESVESSRYRALSDGCRVLCNFACKTEEDFTEMLEKIYNECSRLRLKQQSSETENVENVTEEQVRDPIRVRAKGRAPGMTTKGKRGHQCSICREIGHNRASCPNVVDSCSRIFDEE 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0592 410 PANTHER OS02G0262500 PROTEIN 51 175 - -
Lal23g0592 410 PANTHER OS02G0262500 PROTEIN 177 275 - -
Lal23g0592 410 MobiDBLite consensus disorder prediction 1 20 - -
Lal23g0592 410 Pfam FAR1 DNA-binding domain 60 148 IPR004330 -
Lal23g0592 410 Pfam MULE transposase domain 190 276 IPR018289 -
Lal23g0592 410 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 177 275 IPR031052 GO:0006355
Lal23g0592 410 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 175 IPR031052 GO:0006355
Lal23g0592 410 SUPERFAMILY Retrovirus zinc finger-like domains 374 403 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0592 Lal-Chr23 8698502 8701565 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal23g0592 FAR1 7.5e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0592 - - lang:109327968 246.514