Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0579 ATGTCGTGGCAAACCTACGTTGATGAACACCTTCTGTGTGACATCGAAGGTAATCAACTCACTTCTGCTGCTATCATCGGCCAAGACGGTAGCGTTTGGGCCCAAAGCTCCAATTTTCCTCAGTTCAAGCCTGAGGAAATAACTGCTATAGTCAATGACTTTGCTGAGCCTGGATCACTTGCTCCAACTGGGTTATATCTCGGTGGCACGAAATACATGGTTATCCAAGGTGAACCCGGGGTTGTCATTCGAGGGAAGAAGGGTCCTGGTGGTGTTACTGTTAAGAAGACCAATCAGGCTTTGATCATTGGCATTTATGATGAACCAATGACTCCGGGTCAGTGCAACATGGTGGTTGAAAGGCTTGGTGATTATCTCATTGACCAGGGTCTCTAA 396 0.4697 MSWQTYVDEHLLCDIEGNQLTSAAIIGQDGSVWAQSSNFPQFKPEEITAIVNDFAEPGSLAPTGLYLGGTKYMVIQGEPGVVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMVVERLGDYLIDQGL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0579 131 PANTHER PROFILIN-2 1 131 - -
Lal23g0579 131 CDD PROF 2 130 IPR005455 GO:0003779
Lal23g0579 131 Pfam Profilin 1 130 IPR005455 GO:0003779
Lal23g0579 131 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Lal23g0579 131 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Lal23g0579 131 PRINTS Profilin signature 21 30 IPR005455 GO:0003779
Lal23g0579 131 PRINTS Profilin signature 40 60 IPR005455 GO:0003779
Lal23g0579 131 PRINTS Profilin signature 64 78 IPR005455 GO:0003779
Lal23g0579 131 PRINTS Profilin signature 100 113 IPR005455 GO:0003779
Lal23g0579 131 PRINTS Profilin signature 113 130 IPR005455 GO:0003779
Lal23g0579 131 Gene3D Dynein light chain 2a, cytoplasmic 1 131 - -
Lal23g0579 131 PANTHER PROFILIN 1 131 IPR005455 GO:0003779
Lal23g0579 131 SMART prof_2 1 131 IPR005455 GO:0003779
Lal23g0579 131 SUPERFAMILY Profilin (actin-binding protein) 2 130 IPR036140 -
Lal23g0579 131 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Lal23g0579 131 PRINTS Plant profilin signature 27 40 IPR005455 GO:0003779
Lal23g0579 131 PRINTS Plant profilin signature 52 66 IPR005455 GO:0003779
Lal23g0579 131 PRINTS Plant profilin signature 71 80 IPR005455 GO:0003779
Lal23g0579 131 PRINTS Plant profilin signature 84 99 IPR005455 GO:0003779
Lal23g0579 131 PRINTS Plant profilin signature 104 117 IPR005455 GO:0003779
Lal23g0579 131 PRINTS Plant profilin signature 117 130 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0579 Lal-Chr23 8605568 8607683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0579 1 131 Cytoskeleton Gene Families AT2G19760 77.099 5.85e-76 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0579 23 8605568 8607683 Lal25g0309 25 2120547 2121881 ECH
Lal23g0579 23 8605568 8607683 Lal23g0579 23 8605568 8607683 ECH