Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0554 ATGGACAACATATCAAAGCCCACAATTTTGCCCAACCCAGTGATATTGCATAGCGAGGAATTACTGAAGTATATACTGGAGACTAGCGTATACTCAAGAGAACCAGAGACTCTCAAAGAGCTAAGGAACGCTACTGCAAGCCACCCAATGGGGTTCATGGGAGCAGCACCTGATGTGGGTCAATTAATGGCCATGGTGTTGAAACTGCTGAATGCTAAAAAGACAATTGAAGTGGGAGTTTTTACTGGATACTCTCTTCTCCTCACTGCACTCACCATTCCTCATGATGGAAAGATTATAGCTATAGATCCAGACATAAAATCTTATGAAATTGGACTTCCATTCATTAAAAAGGCTGCTGTGGAACACAAGATTGACTTCATAGACTCTCCAGCTCTGCCTGTTCTTGATAAAATATTAGACGATCCTACAAATGAAGGGACATTTGACTTTGCATTCATTGATGCTGACAAAAATAACTACTGGAATTACCATGAGAGGCTTATCAAATTGGTTAAGATTGGAGGGATAGTTGCCTATGATAACACCCTTTGGGGAGGGATGGTTGCCTTGCCTGAAAAGTTAGTTCCTGAATCAAAAAGAAAGTGGAGACAGTCTACACTTGAATTCAACAAAGCCATTTCAAAGGATTATCGTGTTGAAATTGCTTTTGTTTCAATAGGTGATGGGGTCATTTTCTGCAGGCGTGTTTGCTGA 717 0.4073 MDNISKPTILPNPVILHSEELLKYILETSVYSREPETLKELRNATASHPMGFMGAAPDVGQLMAMVLKLLNAKKTIEVGVFTGYSLLLTALTIPHDGKIIAIDPDIKSYEIGLPFIKKAAVEHKIDFIDSPALPVLDKILDDPTNEGTFDFAFIDADKNNYWNYHERLIKLVKIGGIVAYDNTLWGGMVALPEKLVPESKRKWRQSTLEFNKAISKDYRVEIAFVSIGDGVIFCRRVC 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0554 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Lal23g0554 238 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 4 238 - -
Lal23g0554 238 PANTHER O-METHYLTRANSFERASE-RELATED 4 238 - -
Lal23g0554 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Lal23g0554 238 Pfam O-methyltransferase 27 237 IPR002935 GO:0008171
Lal23g0554 238 Gene3D Vaccinia Virus protein VP39 8 238 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0554 Lal-Chr23 8427719 8429910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0554 15 237 Monolignol Biosynthesis Gene Families AT4G26220 65.919 6.69e-110 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0554 K00588 - gmx:100795229 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0554 23 8427719 8429910 Lal23g0554 23 8427719 8429910 ECH