Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0544 GGAGAAAAACAGGAACATACAACACCAATTGTTATCTTCTACTTTCCAACAAAGAACAAAGTAATGCCTCTATCACTACCACTCCATTCTCCTCTTCCCACCACTTTTTCATTTCTTTCATTATCATCTCTCCCTTCCATTAACCTCCGCCACCACCACCACCGTTACTTAACCACCGCCAGAGCCACTGTGATTCAATCCGACACGACCCAACAACACCCTCTTCTTCAAGTCAACGATCTGAAGGCTAAGATCGTTGAAAACGGTGTCGAGATTCTTCACGGTGTTAACCTCACTGTTAACCAAGGAGAAGTTCATGCAATCATGGGGAAGAACGGTTCTGGAAAGAGTACTTTTGCTAAGGTTCTTGTTGGCCATCCAGACTATGAAGTTACCGGAGGCAGCGTCGTGTTTAAAGGGGAGAATTTGCTTGACATGGAACCCGAGGAAAGATCCCTTGCTGGTCTTTTTATGAGCTTCCAATCCCCTGTTGCGATTCCTGGTGTTTCTAATGATGAGTTTCTAGTCATGGCTTATAATGCTCGAAGAAGAAAGCTTGGCCTCCCTGAGCTTGGACCACTAGAGTGCTTTTCTTACCTGATGGAGAAACTCCAACTCGTTAACATGAAACCTGATTTTCTCAATAGGAATGTCAACGAAGGATTTAGCGGCGGTGAACGCAAACGCAATGAGATTTTGCAGCTTGCGGTTTTGGGGGCAGACTTAGCTATTCTGGACGAAATTGATTCTGGATTGGATGTCGATGCACTCAGAGATGTAGCAAATGCAGTCAACCAGCTTCTGACCCCAAAGAATTCTCTGTTGATGATAACTCATTATCGACGACTTCTCGATCTCCTAAATCCTACACATGTCCATGTTATGGACAAAGGGAGAATTGCAAGGACAGGCGACATATCTTTGGTAGCGGTTATTGAGGATGATGGATATGAAACCGTCTCTGCTTTAAGTTAG 975 0.4441 GEKQEHTTPIVIFYFPTKNKVMPLSLPLHSPLPTTFSFLSLSSLPSINLRHHHHRYLTTARATVIQSDTTQQHPLLQVNDLKAKIVENGVEILHGVNLTVNQGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSVVFKGENLLDMEPEERSLAGLFMSFQSPVAIPGVSNDEFLVMAYNARRRKLGLPELGPLECFSYLMEKLQLVNMKPDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVANAVNQLLTPKNSLLMITHYRRLLDLLNPTHVHVMDKGRIARTGDISLVAVIEDDGYETVSALS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0544 324 PANTHER ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC 66 321 IPR010230 GO:0005524
Lal23g0544 324 Gene3D - 75 322 IPR027417 -
Lal23g0544 324 SMART AAA_5 102 299 IPR003593 -
Lal23g0544 324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 306 IPR027417 -
Lal23g0544 324 ProSitePatterns ABC transporters family signature. 222 236 IPR017871 GO:0005524
Lal23g0544 324 TIGRFAM sufC: FeS assembly ATPase SufC 76 319 IPR010230 GO:0005524
Lal23g0544 324 Pfam ABC transporter 93 247 IPR003439 GO:0005524
Lal23g0544 324 CDD ABC_FeS_Assembly 76 317 IPR010230 GO:0005524
Lal23g0544 324 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 76 322 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0544 Lal-Chr23 8279412 8284104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0544 90 304 Calmodulin-binding Proteins AT2G36910 24.123 1.89e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0544 K09013 - gmx:100811883 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1120 16 7572837 7577273 Lal23g0544 23 8279412 8284104 LSH