Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0539 ATGAAAAGTGGGACAGCTACTCGTCATTCCTCCAACACATATACCTATGATAGTAATGAAGGGTTATGTGGAGCTCCATTGGATGCATGTGCTACTCCTTCTCATCATTCCAAGAAGCCCTCAAATATCAGAATTATTGTGATTGCAGTAGTTGTTTTTTTGGCACTGATATGTTTGATTGGAGCAGTGATATTCATCCTTTGCCGTAAAAGAAAAAGAAAAGCAACAACTTCCATAGAGAATCCACCTTCAGGCCTTAACAAAAAGGGAGTGAAAGAAGGAGGTGATGAGAGTCAAAGATCATCAAATTCCAACCACAGCAGAAGAGGGGATAATAATAATAACATGAAGTTATGCTTCATGAAGGATGATAGAGAGAGATTTGATTTGCATGAGTTGTTAAGAGCTTCTGCTGAGATTTTGGGTAGTGGTTGTTTTAGTTCTTCTTATAAGGCTTCTTTGGTGAGTGGAGCAAAGGTAGTAGTGAAGAGATTCAAGCAAATGAACAATGTAGGGAAGGAAGAGTTTCATGAGCATATGAGAAGGATTGGAAGGTTGAATCATCCTAATTTGCTTCCTCTTGTGGCTTATTATTATAGAAAGGAAGAGAAGCTCTTGGTTTCTGACTATGTTCAGAATGCCAGCCTTGCAGTTCGTCTTCATGGACACCAAACCCTAGGGGAACCAAGCCTTGATTGGCCAATCCGGTTGAAGATTGTAAAAGGCATAGCAACTGGTCTTGAATATTTATATAAGGACATGCCAAGCCTAATAGCACCCCATGGAAATCTTAAATCCTCTAATGTTCTTCTAACTCAATCTTTGGAGCCACTCCTAAGTGATTATAGCTTGGTCCCTGTGACAAACCAGGACCTAGGTCAAGACATAATGGTAATATACAAATCTCCTGAGTTCTTGCACCATGGAAGAATCACAAAGAAGAGTGATGTTTGGTGCCTTGGGATACTAATATTGGAGATCATGGTTGGTAAGTTCTCTTCAAACTTCTTGCAAAAGGGTAAAGGAAGTGAGTTGAGTTTGGCAAATTGGGTGCTTTCAGTTGAACCAGAAGAGTGGAGTAATGAAGTGATTGATAAAGATATGGGAGCAACAAGAAATAGTGATGGAGAGATGATGAAGCTTTTGAAGGTTGCTTTGGATTGTTGTGAAGGGGATGTGGATAAGAGATTGGATTTGAAAGAAGCAGTGGAGAGAATACAAGAGTTGAAAGAAAGGGACCATGATGATGATTTTTATACATCTTATGCTAGTGAAGCAGATATGAGATCTTCAAGGGGATTATCTGGTGAAATCAATTTCTGA 1323 0.3938 MKSGTATRHSSNTYTYDSNEGLCGAPLDACATPSHHSKKPSNIRIIVIAVVVFLALICLIGAVIFILCRKRKRKATTSIENPPSGLNKKGVKEGGDESQRSSNSNHSRRGDNNNNMKLCFMKDDRERFDLHELLRASAEILGSGCFSSSYKASLVSGAKVVVKRFKQMNNVGKEEFHEHMRRIGRLNHPNLLPLVAYYYRKEEKLLVSDYVQNASLAVRLHGHQTLGEPSLDWPIRLKIVKGIATGLEYLYKDMPSLIAPHGNLKSSNVLLTQSLEPLLSDYSLVPVTNQDLGQDIMVIYKSPEFLHHGRITKKSDVWCLGILILEIMVGKFSSNFLQKGKGSELSLANWVLSVEPEEWSNEVIDKDMGATRNSDGEMMKLLKVALDCCEGDVDKRLDLKEAVERIQELKERDHDDDFYTSYASEADMRSSRGLSGEINF 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0539 440 PANTHER LRR RECEPTOR-LIKE KINASE 15 422 - -
Lal23g0539 440 Gene3D Phosphorylase Kinase; domain 1 99 210 - -
Lal23g0539 440 MobiDBLite consensus disorder prediction 77 116 - -
Lal23g0539 440 ProSiteProfiles Protein kinase domain profile. 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0539 440 SUPERFAMILY Protein kinase-like (PK-like) 139 410 IPR011009 -
Lal23g0539 440 MobiDBLite consensus disorder prediction 97 114 - -
Lal23g0539 440 Gene3D Transferase(Phosphotransferase) domain 1 211 429 - -
Lal23g0539 440 Pfam Protein tyrosine and serine/threonine kinase 139 405 IPR001245 GO:0004672|GO:0006468
Lal23g0539 440 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0539 Lal-Chr23 8200414 8206994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0539 15 440 Receptor kinase-like Gene Family AT5G35390 53.007 1.10e-156 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal23g0539 PK_Tyr_Ser-Thr 1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0539 - - gmx:100804368 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0539 23 8200414 8206994 Lal23g0539 23 8200414 8206994 ECH
Lal16g1125 16 7617680 7628929 Lal23g0539 23 8200414 8206994 LSH
Lal15g1046 15 8644398 8662842 Lal23g0539 23 8200414 8206994 LSH