Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0478 ATGTGTCAAAAATGGACAAAGCTTAGCTTCTTGATGATGCCATATCATACATTGACGACAAAGAAAGTTGAATTGGAGAGGCAGTTGGATCGTGCAAAGAAGGAACTCGAGCATGCAAGTAATAACCCAGGGGCACCACGACCTCGACCTGATAAAGAAAACAATCAAATTGGAAGCAAGCTGATTGATTTGGATATAGATGTAAACATTATTGGTTGTGACGCGATGATTCGGATCCAATGTAACAAGAAGAATCATCCTGCAGCGAGGCTAATGGCAGCTCTGAATGAGCTTGAATTGGATGTGCACCATGCCACTGTCTCTGTATTGAATGATTTGATGATCCAACAGGCGAATGTGAACATGGGAAGCCGATTTTACACATAG 387 0.4212 MCQKWTKLSFLMMPYHTLTTKKVELERQLDRAKKELEHASNNPGAPRPRPDKENNQIGSKLIDLDIDVNIIGCDAMIRIQCNKKNHPAARLMAALNELELDVHHATVSVLNDLMIQQANVNMGSRFYT 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0478 128 MobiDBLite consensus disorder prediction 29 58 - -
Lal23g0478 128 PANTHER MYC 16 128 IPR045084 GO:0003700|GO:0006355
Lal23g0478 128 PANTHER TRANSCRIPTION FACTOR MYC2 16 128 - -
Lal23g0478 128 Coils Coil 15 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0478 Lal-Chr23 7538625 7539011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0478 20 128 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 53.211 3.34e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0478 K13422 - gmx:100790854 145.206