Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0463 ATGGGAAAAAAGGTTGCTTCAGCTAGAAGAAATGTAGGTTACCTTCTCTTGAAGGAACTTGGTGGGCAGCTAGGCTGGACTAGAGAGCCTATGACACAAGATCATCAACCAATTATAAATGGTGATATTGATGGATTAGAGAAAAATAAAATTATTGAGATACACAATAGACTTATAAATGAAATTATACCACGGCTTGGGTTGGAATTTGAAACTGAAGATGCGACTTATGATTTTTATAACTCTTATGATTATAGAGTTGGTTTTAGCATGAGGAAAAGTAAAGCACACAACAATGTTGATGGTCACATAATTGATAGAGTGTTTTGTTGTTCATGTGAATGTTATCGTGAGAAGGATAAACGAAGAACTAGTGTGAATAATCTTTGTGCCCAATCACAGTTTGAATGTTTGCCAAGAATGAAAGTAGATTGTCGTTCAACAGAAATGTTTCGTATTGTTCAATTTATTGCTAAACATAAGCATGAGACTTTTAGCATTATCAAGACTCATCTTCATAGATCTCATAGGAAAATAACACCCTCTCTAGCATCTGAGATTGACTTAGCTGAAAGTTCTAGTATTGCTCCAAAAGTAAGTTGTGAATTAATGGAAAGAAGAGTTGGAGGACGTGAAAACTTGGGATTCATTCATGACAACTATAAAAATTATTTACGCTCAAAGCGAACAATTCAAATGAGATTAGGATATATAGGTGGTTTGCTTGAGTATTTACAACAAATGAAAGTAGAAGATCCTAATTTTTTCTACGCCATACAAGTTGATGAGGATGATTTAATAACCAATATATTTTGGAGAGATGCAAAAATGATGGTTGATTATTCATATTTTGGTGATGTTGTTTGTTTTGATACCACATATAGAAAAAATAAAGAATGTCGTCCATTTGCCATGTTTATTGGAGTAGATCATCATAAACTTAGCACTATCTTTGGTGCTGCAAAAACATTTGTTTGGTTGTTCAAATCTTTATCTACAGCAATGTCACGAAAAAAGCCACAAACTATACTCACTAACCAAGATGCAGCAAGGGCGAAGGCTCTAAGCTTGACATGGCCAAAGACATCTCACCACCTATGTATTTGGCACTTGTACCTGAATGCTTTGAAGAATCTTAGTGTTGTATTTGGAGAGTTTCAAGACTTTCAACAAGAACTTCAGCAAGTGCATATATGA 1197 0.3442 MGKKVASARRNVGYLLLKELGGQLGWTREPMTQDHQPIINGDIDGLEKNKIIEIHNRLINEIIPRLGLEFETEDATYDFYNSYDYRVGFSMRKSKAHNNVDGHIIDRVFCCSCECYREKDKRRTSVNNLCAQSQFECLPRMKVDCRSTEMFRIVQFIAKHKHETFSIIKTHLHRSHRKITPSLASEIDLAESSSIAPKVSCELMERRVGGRENLGFIHDNYKNYLRSKRTIQMRLGYIGGLLEYLQQMKVEDPNFFYAIQVDEDDLITNIFWRDAKMMVDYSYFGDVVCFDTTYRKNKECRPFAMFIGVDHHKLSTIFGAAKTFVWLFKSLSTAMSRKKPQTILTNQDAARAKALSLTWPKTSHHLCIWHLYLNALKNLSVVFGEFQDFQQELQQVHI 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0463 398 Pfam MULE transposase domain 287 372 IPR018289 -
Lal23g0463 398 Pfam FAR1 DNA-binding domain 78 164 IPR004330 -
Lal23g0463 398 PANTHER OS03G0181600 PROTEIN 53 392 - -
Lal23g0463 398 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 53 392 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0463 Lal-Chr23 7360697 7363244 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal23g0463 MULE 1.1e-17 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0463 K17604 - ccaj:109817905 478.018