Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0440 ATGCAAGTTAAAAAGGCAGAACTTGAAATTGGTCCCAGCTTACCAAATACAAACACCATAGACTCATTTTTCTCTCACTTCCAACCACCAAATACTACTACTCACATTACAAACTCTATATTGGAGCGATTAGGCTCTTCGGTGTACCTTAGACAAATAGAGATGCTGCAAAATTTCTACAAAGACACTATAGTAAATGGGTCATTTATTTCCACTACCACCAATTCCTTGGTAAGCACAAGGAAGAAAAAGATGTATAGGGGAGTGAGACAAAGACAATGGGGTAAATGGGTGGCAGAGATTAGATTAACTCAGAATAGAAAGAGGGTGTGGCTTGGTACTTTTGATTCTCCTGAATCTGCTGCTTATGCTTATGATTGTGCAGCTTATAAGCTCAGAGGTGAATATGCACGTTTGAATTTCCCAAACCTTAATGACTCAAAAATAATATGTAACTTGTTGGGATTTGATGATTCAATGAGGTTGGTTGCATTGAAGAGTTCAGTGGATGCTAAAATTAAAGCAATATGTCATAAGGTGAAGAAGGAGAAAGCCAAGATCAAGAGTGATGCAAAGAAGCTTGGTTCGTGTGATAGTAATATGAATGATAATGGTTATTGTGATAGTGAGAAACCACAGAAGATAGAGTCAATGTCATCGTCTTGTTCTTCATCTTCTTTAATGTTGTCGGCATCAAGTTTTTGCGATGGTTTGACAAATGAGTTTCTTTCACCGAGTGTTTCAAATGAATGTGCAACAATGGTGACAGAGGAATCAGGTTTCGAAGAATGCTGTTCCTTGGCAAGGATGCCTTCATTTGATCCTGAGTTGATTTGGGAAGTTCTTGGAAATTAG 855 0.3801 MQVKKAELEIGPSLPNTNTIDSFFSHFQPPNTTTHITNSILERLGSSVYLRQIEMLQNFYKDTIVNGSFISTTTNSLVSTRKKKMYRGVRQRQWGKWVAEIRLTQNRKRVWLGTFDSPESAAYAYDCAAYKLRGEYARLNFPNLNDSKIICNLLGFDDSMRLVALKSSVDAKIKAICHKVKKEKAKIKSDAKKLGSCDSNMNDNGYCDSEKPQKIESMSSSCSSSSLMLSASSFCDGLTNEFLSPSVSNECATMVTEESGFEECCSLARMPSFDPELIWEVLGN 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0440 284 ProSiteProfiles AP2/ERF domain profile. 85 142 IPR001471 GO:0003700|GO:0006355
Lal23g0440 284 CDD AP2 86 144 IPR001471 GO:0003700|GO:0006355
Lal23g0440 284 Pfam AP2 domain 86 135 IPR001471 GO:0003700|GO:0006355
Lal23g0440 284 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700|GO:0006355
Lal23g0440 284 PRINTS Ethylene responsive element binding protein signature 108 124 IPR001471 GO:0003700|GO:0006355
Lal23g0440 284 SMART rav1_2 85 148 IPR001471 GO:0003700|GO:0006355
Lal23g0440 284 Gene3D AP2/ERF domain 84 143 IPR036955 GO:0003700|GO:0006355
Lal23g0440 284 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 16 283 - -
Lal23g0440 284 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 16 283 - -
Lal23g0440 284 SUPERFAMILY DNA-binding domain 85 143 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0440 Lal-Chr23 7127073 7127927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0440 18 284 AP2-EREBP Transcription Factor Family AT1G64380 41.379 4.52e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal23g0440 AP2 7.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0440 - - lang:109332433 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0440 23 7127073 7127927 Lal23g0440 23 7127073 7127927 ECH