Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0422 ATGTCTTGGAGCCAATTCATTCACTGCAGTGTGAAGACTAAACAAGCAGAAACACCTCGTTTCCGTGCTGCTGTTAGAAGTGTAAAAGTTAGTACACTGGGAATGAAATTCTTTCGCATTTTCTTTTCTATTTTTGTACTATGCTTGATTTTGTGGCAAGGATATGGTGAACCTGTTGAAGATAAGAAAATTTTGCTTGATTTTGTGAACAAGTTCCCACCTTCAAAGCTTTTAAATTGGAATGAAAGTTCTTCAGTTTGTGATAATTGGACTGGTGTGACTTGCAATGAAGACAATTCAAGAGTTATAGCTATTAGATTACCAGGTGTTGGATTTCATGGTACTATTCCACCTAACACTATTAGCAACCTCACTTCACTTCAAATTTTGAGCCTCAGATCCAATTTCATATGTGGCAATTTCCCTTCTGATTTTACCCAACTTAGGAACTTGTCTTTTCTTTATCTTCAGTTCAATAATTTGTCTGGTCCTTTGCCTGATTTCTCAGCTTGGAAGAATCTTACTATTGTTAATTTGTCTAATAACAATTTCAATGGCAGTTTGCCTCTATCTATTGCCAATTTAACTCGGCTTGCGAGTTTGAACCTCGCGAACAATTCGCTTTCTGGTGAAATTCCTGACCTGAAGTTGCTTAGGTTGCAATTGCTTAATTTGTCTAACAACCATTTGCATGGTGGTGTGCCGAAATCACTCAAGAGATTTCCTAAGTCGGCGTTCTCTGGAAATAACATTTCTCTTGGAGTTGGAAATTCTTCTGCTGCTTCATCCATGCATCCACCGCCGGCTTGTGAGCCATCTTTGATGTCTAAGAAACATGGAAGGCTTAGAAAAATGGTGCTGCTCGGAATTATTATTGCTTGTGGTGTTATTGGTCTTGTCGGGTTTGTGTTTTTTATCTTTTTTTGCTGCTCTAGAAGAATGAGGGGTGAAGGTGATGATGCCTTTGGAGGGAAATTGCAGAAGGGAGGAATGTCTCCCGAGAAAGCTGTTTCGCGGAACCAGGATGAAAATAATAAACTGACTTTCTTTGAGGGGTGTAATTATGCCTTTGATTTGGAGGATTTATTGACGGCTTCCGCAGAGGTGCTGGGGAAGGGAACATTTGGTACTGCATACAAAGCAGTACTAGAGGATGCGACTATGGTTGTTGTGAAGAGGTTAAAGGAGGTTGCTGTTGGAAAGAAGGATTTTGAGCAACACATGGAGATTGTGGGAAATCTTAAACATGAGAATGTGGTTGAGCTCAAAGCATATTATTATTCGAAAGACGAGAAACTGATGGTATATGATTACTATAGTGAAGGGAGCATCTCTTCTATGTTGCATGGTAAAAGAGGAGAGGATAGGGTGACTTTAGATTGGGATACTCGGCTGAGAATAGCTCTAGGTGCTGCAAGAGGCATTGCTCGTATCCATGTTGAGAATGGTGGTAAGCTTGTACATGGCAGCATCAAATCCTCAAATATTTTTCTCAATGGCAAACAGTACGGTTGTGTGTCTGACCTTGGCCTTGCAATGACAATGAACTTGCTCGCCCTACCCATTTCTAGAGCTTCGGGTTATCGTGCACCTGAAGTTACAGACACTAGGAAAGCAGGACAAGCTTCAGATGTTTACAGCTTCGGTGTGTTGTTACTAGAGCTTTTGACTAGGAAATCCCCTATTCACACAACCGTTGGCAATGAGATTATCCACCTGGTGAGGTGGGTTCATTCAGTTGTGAGAGAGGAGTGGACAGCTGAAGTGTTTGACTTAGAGCTTATGAGATATCCAAACATAGAGGAAGAGATGGTGGAAATGCTACAGATAGCCATGTCATGCGTCGTAAGGATGCCTGATCAGAGGCCGAAGATGTCGGAAGTCGTGAAGATGATAGAAAACATCAGGCAGATTGATACAATGGCTCAGCAGCCATCATCATCTGAGAACTAA 1953 0.4132 MSWSQFIHCSVKTKQAETPRFRAAVRSVKVSTLGMKFFRIFFSIFVLCLILWQGYGEPVEDKKILLDFVNKFPPSKLLNWNESSSVCDNWTGVTCNEDNSRVIAIRLPGVGFHGTIPPNTISNLTSLQILSLRSNFICGNFPSDFTQLRNLSFLYLQFNNLSGPLPDFSAWKNLTIVNLSNNNFNGSLPLSIANLTRLASLNLANNSLSGEIPDLKLLRLQLLNLSNNHLHGGVPKSLKRFPKSAFSGNNISLGVGNSSAASSMHPPPACEPSLMSKKHGRLRKMVLLGIIIACGVIGLVGFVFFIFFCCSRRMRGEGDDAFGGKLQKGGMSPEKAVSRNQDENNKLTFFEGCNYAFDLEDLLTASAEVLGKGTFGTAYKAVLEDATMVVVKRLKEVAVGKKDFEQHMEIVGNLKHENVVELKAYYYSKDEKLMVYDYYSEGSISSMLHGKRGEDRVTLDWDTRLRIALGAARGIARIHVENGGKLVHGSIKSSNIFLNGKQYGCVSDLGLAMTMNLLALPISRASGYRAPEVTDTRKAGQASDVYSFGVLLLELLTRKSPIHTTVGNEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENIRQIDTMAQQPSSSEN 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0422 650 PANTHER OS05G0588300 PROTEIN 55 644 - -
Lal23g0422 650 Gene3D Transferase(Phosphotransferase) domain 1 440 649 - -
Lal23g0422 650 Gene3D Ribonuclease Inhibitor 60 169 IPR032675 -
Lal23g0422 650 SUPERFAMILY L domain-like 72 240 - -
Lal23g0422 650 ProSiteProfiles Leucine-rich repeat profile. 197 219 IPR001611 GO:0005515
Lal23g0422 650 ProSiteProfiles Protein kinase domain profile. 364 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0422 650 Gene3D Phosphorylase Kinase; domain 1 331 438 - -
Lal23g0422 650 PANTHER PROTEIN, PUTATIVE-RELATED 55 644 - -
Lal23g0422 650 SUPERFAMILY Protein kinase-like (PK-like) 368 633 IPR011009 -
Lal23g0422 650 Pfam Leucine rich repeat N-terminal domain 60 96 IPR013210 -
Lal23g0422 650 Pfam Protein kinase domain 367 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0422 650 ProSitePatterns Protein kinases ATP-binding region signature. 370 401 IPR017441 GO:0005524
Lal23g0422 650 Gene3D Ribonuclease Inhibitor 170 263 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0422 Lal-Chr23 6890408 6894685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0422 50 635 Receptor kinase-like Gene Family AT4G23740 65.488 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal23g0422 Pkinase 4.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0422 - - lang:109349930 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0422 23 6890408 6894685 Lal23g0422 23 6890408 6894685 ECH
Lal16g1170 16 8011135 8015876 Lal23g0422 23 6890408 6894685 LSH
Lal15g1440 15 16588792 16591881 Lal23g0422 23 6890408 6894685 LSH