Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0421 ATGAACGACTCAGATGTCTCCAGGCAAATCGATCAGATGGTCAGGTTTATACGCCAGGAAGCAGAGGAAAAAGCCAGCGAGATCTCTGTCTCTGCCGAAGAAGAGTTCAACATCGAGAAGCTTCAGTTGGTAGAAGCCGAGAAGAAGAAGATCAGACAGGAATACGAGCGCAAAGAGAAACAAGTTGAAATTCGCAAGAAAATTGAGTACTCGATGCAACTGAATGCTTCTCGTATAAAAGTTCTTCAAGCTCAAGATGATGTAGTTAATTCAATGAAAGAAGCTGCATCCAAGGAACTTCTGAGTGTGAGCCATCACCAACATTTGAGTTTTACCCATCATGATCATGTGTACAGGAACCTTCTGAAAGATCTCATTGTTCAGAGTTTGCTAAGGCTGAAAGAACCGTCTGTCTTATTGAGATGTCGGGAACATGACCTGCAATTGGTAGAGCATGTGCTAGCTTCAGCTGCACAGGAGTATGCTGACAAAGAAAATATACATCTACCAGAGATCATTGTCGACAACAATGTCTTTCTTCCACCTGCACCCAGCCATCATAATGCCCATGAACTCCACTGCTCTGGTGGGGTGGTGCTGGCTTCTCGAGATGGAAAGATTGTGTTTGAAAATACTCTTGATGCACGACTGGATGTGTTGTTCCGTAACAAGCTTCCAGAGCTGGTTATTTTTAAGATATTGGAAACTTTTGATATTGAAATAAAACGCTTCAGATCCGGAAACAGCTCTTTGGACAAGTTGCTGCTTGAAGGCTTTGATTGGATTGTTTTATTGCTCCGAGGTTACTTATATCCTGAATCAAAAGATTGTCTTTGA 837 0.4229 MNDSDVSRQIDQMVRFIRQEAEEKASEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNSMKEAASKELLSVSHHQHLSFTHHDHVYRNLLKDLIVQSLLRLKEPSVLLRCREHDLQLVEHVLASAAQEYADKENIHLPEIIVDNNVFLPPAPSHHNAHELHCSGGVVLASRDGKIVFENTLDARLDVLFRNKLPELVIFKILETFDIEIKRFRSGNSSLDKLLLEGFDWIVLLLRGYLYPESKDCL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0421 278 Pfam ATP synthase (E/31 kDa) subunit 16 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lal23g0421 278 Coils Coil 38 61 - -
Lal23g0421 278 Gene3D - 93 234 IPR038495 -
Lal23g0421 278 SUPERFAMILY V-type ATPase subunit E-like 87 228 - -
Lal23g0421 278 PANTHER BNAC03G72900D PROTEIN 1 241 - -
Lal23g0421 278 Hamap V-type proton ATPase subunit E [atpE]. 8 232 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lal23g0421 278 Gene3D - 1 62 - -
Lal23g0421 278 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 241 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0421 Lal-Chr23 6851877 6854791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0421 1 226 Primary Pumps ATPases(2) AT4G11150 73.894 5.05e-117 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0421 K02150 - gmx:106794127 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0421 23 6851877 6854791 Lal23g0421 23 6851877 6854791 ECH
Lal16g1171 16 8022469 8025617 Lal23g0421 23 6851877 6854791 LSH
Lal15g1429 15 16417328 16426397 Lal23g0421 23 6851877 6854791 LSH