Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0321 ATGGACGAGAACGTTCTCGACGATATCATTCGGAGGCTCGTGGCGGCGAAGAACGGTAGAACAACGAGGCAGGTTCAGCTTACGGAGGCGGAAATCCGACAACTGTGTACTTCTTCCAAGGAGATATTTCTCGGTCAACCAAATCTTCTTGAGCTCGAAGCTCCTATCAAGATTTGTGGAGATGTTCATGGTCAGTATTCAGATCTTCTGCGGTTGTTTGAATATGGGGGATACCCACCTGAAGCAAACTATTTATTTCTTGGAGATTATGTTGATCGAGGTGCGCAGAGTATAGAGACAATATGTTTACTCCTCGCGTACAAGATCAAATACAAGGAGAACTTCTTTCTTCTCAGGGGAAACCATGAATGTGCCTCCATCAATCGCATATATGGTTTCTATGACGAGTGCAAGAGGAGGTTTAATGTTCGTCTCTGGAAAGCATTTACTGACTGCTTTAATTGTCTACCCGTTGCTGCTCTTATAGATGAAAAGATCCTTTGCATGCATGGTGGACTATCCCCTGATCTTAGAAACTTGGATCAGATAAGGAATATTGCTCGTCCTATTGACGTACCTGACCATGGCCTTCTCTGTGACCTGCTATGGGCCGACCCTGATAAAGACCTTGATGGCTGGGGAGAAAATGACCGAGGTGTGTCATTTACATTTGGGGCTGACAAGGTTGCTGAATTTCTTGAACAACTTGATCTCGATCTGATTTGCAGAGCTCACCAGCTGCCTGTCTATGTCAATGTTGTTGTATGTATGCATTGTGGCTTTATCTCGGTTGTAGAAGATGGATACGAGTTTTTTGCTAAGCGTCAACTTGTGACTATATTCTCAGCACCAAATTATTGTGGTGAGTTTGATAATGCTGGTGCTATGATGAGTGTGGATGAAACCTTGACATGCTCTTTCCAGATACTTAAACCTTCTGACAAGAAATTTAAAATTGGATTCGGCAACAGTACATCAGGACTGGGGACTCCACCTCATAAGCGTCTAGGAGTTGTGGTTATTGTTGATACTCGAGCTCAACAAAGTTTTCTACCAGATGATTTCCATATTTTCCAAAGCCCATTCATGGGTGGGAGAGCTTGA 1104 0.4357 MDENVLDDIIRRLVAAKNGRTTRQVQLTEAEIRQLCTSSKEIFLGQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGYPPEANYLFLGDYVDRGAQSIETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLRNLDQIRNIARPIDVPDHGLLCDLLWADPDKDLDGWGENDRGVSFTFGADKVAEFLEQLDLDLICRAHQLPVYVNVVVCMHCGFISVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDETLTCSFQILKPSDKKFKIGFGNSTSGLGTPPHKRLGVVVIVDTRAQQSFLPDDFHIFQSPFMGGRA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0321 367 CDD MPP_PP1_PPKL 5 312 - -
Lal23g0321 367 Pfam Serine-threonine protein phosphatase N-terminal domain 6 53 IPR031675 -
Lal23g0321 367 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 327 - -
Lal23g0321 367 ProSitePatterns Serine/threonine specific protein phosphatases signature. 118 123 IPR006186 GO:0016787
Lal23g0321 367 Pfam Calcineurin-like phosphoesterase 55 246 IPR004843 GO:0016787
Lal23g0321 367 SUPERFAMILY Metallo-dependent phosphatases 22 317 IPR029052 -
Lal23g0321 367 Gene3D - 1 323 IPR029052 -
Lal23g0321 367 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Lal23g0321 367 PRINTS Serine/threonine phosphatase family signature 84 111 IPR006186 GO:0016787
Lal23g0321 367 PRINTS Serine/threonine phosphatase family signature 117 141 IPR006186 GO:0016787
Lal23g0321 367 PRINTS Serine/threonine phosphatase family signature 151 177 IPR006186 GO:0016787
Lal23g0321 367 PRINTS Serine/threonine phosphatase family signature 180 207 IPR006186 GO:0016787
Lal23g0321 367 PRINTS Serine/threonine phosphatase family signature 254 274 IPR006186 GO:0016787
Lal23g0321 367 PRINTS Serine/threonine phosphatase family signature 276 292 IPR006186 GO:0016787
Lal23g0321 367 SMART pp2a_7 27 314 IPR006186 GO:0016787
Lal23g0321 367 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0321 Lal-Chr23 3782888 3786954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0321 56 243 Calmodulin-binding Proteins AT5G63870 30.045 6.26e-26 103