Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0268 ATGGGTAAGGCGTCAAAGTGGTTTCGCGCTCTTCTTGGTCTTAAAAAAACTGAATCATCACAATCTTCTTCCTTCTCTCCCAAAAACAAACGCCGATGGAGCTTCCTTAAACCTTCTTCCACTCAAAACGACAACCATACACTCACCTCGCCAGAACTACCCCTTCATCCTAACAACCCCGCTGTAGCAGTAGCTGCCGCCACAGCTGCGGTAGCAGAGGCGGCTGTCGCCGCTGCTCAAGCTGCTGCCGCCGTGGTGAGGCTGACGAGCAGCAGCAGGTGTGCCGGAAGCATTGGGATTCGTGAGGAATGGGCCGCTGTTAAGATTCAATCCGCTTTTCGAGGCTGTTTGGCAAGGAAAGCGCTGCGAGCATTAAAAGGGCTGGTGAAGCTCCAGGCACTGGTGAGAGGTCACATTGAGAGGAAGCGGCAAGCGAAGAAGAGGGCGAAAAGAATGCAAGCACACTTACAAGCACAGGCACGGTTCTGTGCCGGCCGAGCTCAGATAATGCAGACACCATGTTATTCAACTTCAAAATCATCTACCTGCCTCCTCTATGGTCCAGGAACACCAGACAAATTTGAAAGCACAATCAGATCTAAGAGCATGAAATATGAGCAGTCACCGGTACTCAAGAGAAATGGCTCCAAATCCTGTGGGAGTAGATCAGAAAGTGTTGTAGATGAACAATCCTGGTCCCAAGGAAGATCATTCATAAGAACTAGCTGCAAGAGTGAAGAAAAAAGTGATAGGATTCTAGAAATTGATTACGGAAAACCGCAACTTGCATCGAAACGAAGAAGCCTTTTTTTCACAAGAGACTCAACTTCTCTCCAATCAGGACAAACTTCATCTTGTGAAGTTGAAGAGACACCCTTTTGCACTGCAAGCAATAGTCCTCAATATTTATCTGCAACATCTAAAGAAGATGATGGTTCAAAAAGAACTCATTGCACTCCTACAAGGAGTGATGGGTCAAGAAGCTACTACCTGTGTGGTTACTCTGACTATCCAAGTTACATGGCTTATACTGAGTCATCAAAGGCAAAAGTTAGATCATTGAGTGCACCAAAACAAAGGCCACAATATGACAGGTCAAGTTCATCAAATAGGTACTCACTTAATGGATTTGGTGATACAAAAATGGCCACACAGAAAGTATCTGCATTGCACACAGGCTTCACCAACAAAGCCTATCCTGGCTCTGGCCGTTTGGACAAGCTTGGCATGCCTCTGGGGTATAGATACTGA 1251 0.4644 MGKASKWFRALLGLKKTESSQSSSFSPKNKRRWSFLKPSSTQNDNHTLTSPELPLHPNNPAVAVAAATAAVAEAAVAAAQAAAAVVRLTSSSRCAGSIGIREEWAAVKIQSAFRGCLARKALRALKGLVKLQALVRGHIERKRQAKKRAKRMQAHLQAQARFCAGRAQIMQTPCYSTSKSSTCLLYGPGTPDKFESTIRSKSMKYEQSPVLKRNGSKSCGSRSESVVDEQSWSQGRSFIRTSCKSEEKSDRILEIDYGKPQLASKRRSLFFTRDSTSLQSGQTSSCEVEETPFCTASNSPQYLSATSKEDDGSKRTHCTPTRSDGSRSYYLCGYSDYPSYMAYTESSKAKVRSLSAPKQRPQYDRSSSSNRYSLNGFGDTKMATQKVSALHTGFTNKAYPGSGRLDKLGMPLGYRY 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0268 416 Pfam Protein of unknown function (DUF4005) 299 375 IPR025064 -
Lal23g0268 416 Pfam IQ calmodulin-binding motif 104 123 IPR000048 GO:0005515
Lal23g0268 416 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
Lal23g0268 416 SMART iq_5 124 145 IPR000048 GO:0005515
Lal23g0268 416 SMART iq_5 101 123 IPR000048 GO:0005515
Lal23g0268 416 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 411 - -
Lal23g0268 416 MobiDBLite consensus disorder prediction 352 376 - -
Lal23g0268 416 MobiDBLite consensus disorder prediction 19 54 - -
Lal23g0268 416 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
Lal23g0268 416 PANTHER IQ-DOMAIN 5-RELATED 1 411 - -
Lal23g0268 416 Gene3D - 101 155 - -
Lal23g0268 416 MobiDBLite consensus disorder prediction 299 323 - -
Lal23g0268 416 Coils Coil 139 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0268 Lal-Chr23 2660442 2666709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0268 103 416 IQD Protein Family AT4G23060 45.133 1.15e-65 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0268 - - lang:109330707 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0268 23 2660442 2666709 Lal23g0268 23 2660442 2666709 ECH