Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0222 ATGGCAACTGGGGAAGAGAGCGCGTCTAAACCTTCTAAGTCATCTTCTTCAACTCAGGAAACATCGAAAGCGCCTTCATATCCTGATTGGTCAAGCTCTATGCAGGCTTATTATGCTCCTCGAGCATCACCACCTCCCTTTTATGTCTCAACTGTTGCTTCCCCGAGTCTCCACCCGTATATGTGGGGAAGCCAGCATCCCTTAATGTCGCCATATGGGACTCCGGTTCCATATCCAACTATGTACCCTCCGGGGAGTGTCTACGCTCATCCTAGCTTGGCAATGACTACAAGTGCTATGCAGAAGAGTACAGAGTTTGAAGCAAGGGGTCCGGATGGAAAAGATCGCGATTCAGCCAAAAAATTGAAACGAGCTTCCGCAAAGACAGAATCCAAAGCAGGGGAGAGTGGAAAGACAGGCTCAGGTTCAGCAAATGATGGCATCTCACAAAGCGCCGAAAGTGGTTCAGAGCATTCCTCAAATGCTAGTGATGAGATTTCTAACCATCAGGAATCAGCTACAAAAAGGAAGGGAAGCTTCAATCAGATGCTTGTTGAAGGTGCCGAATCTTCAAAAATGAGACATAATCAATCCGGTGCCGCAGGAGCTGCAGCTCCACCGGCCATAATGAGACGTGAAGTTACACTTGGCAAACAATGGATGCAACCCGATGAACATGAGCTGAAAAGACAGAAGAGGAAACTGTCGAACAGAGAGTCGGCTAGGAGGTCAAGGCTGCGCAAGCAGGCTGAATGTGAAGAGTTACAGAAGAGGGTGGAGACACTCGGAGGCGAGAATCGAATTCTTCGAGAAGAGCTTCAGACACTTTCTGAAGATTGCGAGAAGCTTATGTCGGAAAATAATTCTATAAAGGAAGAGTTGGAAAGGTTGTGTGGGCAAGAAGCAATTGCTAACCTTGGATGA 924 0.4751 MATGEESASKPSKSSSSTQETSKAPSYPDWSSSMQAYYAPRASPPPFYVSTVASPSLHPYMWGSQHPLMSPYGTPVPYPTMYPPGSVYAHPSLAMTTSAMQKSTEFEARGPDGKDRDSAKKLKRASAKTESKAGESGKTGSGSANDGISQSAESGSEHSSNASDEISNHQESATKRKGSFNQMLVEGAESSKMRHNQSGAAGAAAPPAIMRREVTLGKQWMQPDEHELKRQKRKLSNRESARRSRLRKQAECEELQKRVETLGGENRILREELQTLSEDCEKLMSENNSIKEELERLCGQEAIANLG 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0222 307 Coils Coil 238 300 - -
Lal23g0222 307 MobiDBLite consensus disorder prediction 1 30 - -
Lal23g0222 307 Pfam bZIP transcription factor 225 287 IPR004827 GO:0003700|GO:0006355
Lal23g0222 307 MobiDBLite consensus disorder prediction 99 250 - -
Lal23g0222 307 PANTHER G-BOX-BINDING FACTOR 1 188 306 - -
Lal23g0222 307 PANTHER G-BOX-BINDING FACTOR 1 1 189 - -
Lal23g0222 307 Pfam G-box binding protein MFMR 7 93 IPR012900 -
Lal23g0222 307 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 232 247 IPR004827 GO:0003700|GO:0006355
Lal23g0222 307 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 227 290 IPR004827 GO:0003700|GO:0006355
Lal23g0222 307 MobiDBLite consensus disorder prediction 218 234 - -
Lal23g0222 307 Gene3D - 228 282 - -
Lal23g0222 307 SMART brlzneu 225 289 IPR004827 GO:0003700|GO:0006355
Lal23g0222 307 MobiDBLite consensus disorder prediction 132 179 - -
Lal23g0222 307 SUPERFAMILY Leucine zipper domain 228 284 IPR046347 GO:0003700|GO:0006355
Lal23g0222 307 MobiDBLite consensus disorder prediction 107 131 - -
Lal23g0222 307 CDD bZIP_plant_GBF1 230 280 IPR045314 GO:0003700|GO:0006355
Lal23g0222 307 PANTHER G-BOX-BINDING FACTOR 3-RELATED 188 306 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lal23g0222 307 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 189 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0222 Lal-Chr23 2076343 2081838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0222 1 306 bZIP Transcription Factor Family AT4G36730 49.524 3.07e-86 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal23g0222 MFMR 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0222 K09060 - gmx:778124 405.601