Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0218 ATGGATCATGCTGAATTAACCACCGATCAGGTTCTGAGGAGGGATATTCCATGGGAGACATACATGTCAACCAAGCTCATATCTGGAACAAGCCTTCAGCTCTTTCGCCGTTATGATCACCGGCCGGAAAGTATCAGAGCACAGTTGCTCGATGATGATGGTCCGGCTTACGTCCAGGTGTTTATTCATGTTTTGCGTGATATTCATAAAGAAGATACTGTTGAGTATGTTTTGGCGCTGATTGATGAAATGCTTGCAGCAAACCCGAAAAGAGCAAGGCTGTTTCATCATAGCACCCTTGCTGATGAAGATACTTATGAACCATTCTTAAGTTAA 336 0.4345 MDHAELTTDQVLRRDIPWETYMSTKLISGTSLQLFRRYDHRPESIRAQLLDDDGPAYVQVFIHVLRDIHKEDTVEYVLALIDEMLAANPKRARLFHHSTLADEDTYEPFLS 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0218 111 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 2 110 - -
Lal23g0218 111 SUPERFAMILY ARM repeat 7 110 IPR016024 -
Lal23g0218 111 Pfam V-ATPase subunit H 3 110 IPR004908 GO:0000221|GO:0046961|GO:1902600
Lal23g0218 111 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 2 110 IPR004908 GO:0000221|GO:0046961|GO:1902600
Lal23g0218 111 Gene3D - 2 111 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0218 1 110 Primary Pumps ATPases(2) AT3G42050 73.636 6.85e-56 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0218 K02144 - gmx:100788723 199.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1508 16 12014043 12023036 Lal23g0218 23 2030143 2031253 LSH