Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0193 ATGAATGATGTAACATTCATGGAGAAGAAGAGTGTAAAGGTGACGATAGCGCAGACCACATTTCCTACACTTCAACAAGTACTATTGCTGATTGATTCTTTAAAGAATCGAGTTCATGCTGATCGATTTATTTCCATAGAGAGAAGAGTGGAAGAAAATCGACAGAAGCTGGCTGGTCTCACAGACAATCTTTTTGAAATATCAAAGGAAAGAAGCACAGGTAGCTTTACTAGAACACAAAGAAGTCCTGATCTACTGGCTAAGAGGCAACAAGATGCAATTGATGCGAACAATGGAGGTAGGGAGAGGACTGGTGATCATGAAGATAGCCTTGGTTGTACAGCAGTTCTTCATAAATATAATGCTCCTGCCCCTGACAAAAGTCTTGTTGTGACTATTATGTTACCTAAAATTAGGAGGATACCTAAGTACTCTACATGGCTTTTTCTGGACAGAAATGAATTAACGACGAAGGATCAGTCAGTGGAAGGCCGGCCGCAAATTTATTATGATAAGGATGGTGGAGAAACACTTATTTGCAGTGACAGTGAGGAGGAAATGCCAGTGGAAGAAGAGGAAAAAAGAGACTTCATTCAATCAGAAGATTTTATACTCTGGACCATCAAACAACTTGGTTTGTGTGATCTTGTTCTGGAGTCATTGAGTCATTTGTTTTCTCGAGACGCCAGCGAAATCAAGGAAAGATATGAAACTCTTAGCAATAAAGAGAATGCTGCTAGTGGTTCTAATACTGGAGATACTGAAGAGAATTTTCAAAGTGGAAATTTACATATGGAAAAGGATATTGGAGCAGCTCAAGCCTCTTTTGATAACCTATTTTGCCGACGATGTCTTGCTTTCGTTTGCAGATTACATGGATGTTCACAGGATGTTGTATTACCTGCTGAGAAACAAACAACGTGGATTCCTCCTGATGTCGAAAATGCACCATGCGGGCCAAATTGTTTTCTACTGGTACTTAAGTCAGAAAATTTTGCCAAAGTGACGTCTTCTTCCCAAGCTGATGTTGAAGAGAATTGCTCTGGTGATGTGGAAGTGCAAATGTTATCTCAGATGTCTAGTGATATATCTGCTAGCAAGCAGATAAATTGCAGCAAAACTGTAAGTGCTTCATCTAATGCAAAGAACATATATGAGAGTAGTGGCTCAGAAAATGCTCATGTACAGGACACTGTTTCACCTTCCAAATCTGTGAATAATGATGGGATTATCAAGACAAACAGTAAGCGTTTGGCAGAACACGTTCTTGTTTTCATGCAGAAGCGGCAAAAGAAAGCAGCGATATCAGATTCTAATGACATTGGTGAAGGTCTTGGTTGTTCATCAAACAAGATGGGTACAAACTCTCCCATCATCAGCAGTGAGGACAACATGACGAAAGAAGAGTTTGTACATGAGAAGAATTGTCAACAGGAATTCACTGACAACGAGTCTTGGAAACCTCTTGAAAAAGGGCTTCTATATCAAGGAATGGAGATGTTTGGTAGAAACAGCTGCTTAATAGCCAGGAACCTCTTATCTGGTCTAAAGACATGCTGGGAGATTTACCAATACATGAATTGCAACGAGGGAAAGATGTCAGGTCCTATTGGTGATGCTCCAAATTCTCCTCTGGAAGACTATTCCAAGGGTAATAATAAGGTGAGCCGGAGACCAAGATCTGTACGTAGAAGAGGAAAATTCGGTCGCTTAAGGTTTACCTGGAAATCTGCTACTTATCGTTCAAATAGGAAAAGGGTTACGGAGGGAACAGGTCAGTTCTACAAGCATTATAATCCATGCGATTGCCAACCAGCTTGTGGAAAGGAGTGTCCTTGTTGTGAAAATGGAATCTACTGTGAGAAGTACTGTGGATGCCCAGAGAGTTGCAAGAATCGATTCCGTGGATGTCGCTGTGCTAAGAATCAGTGCCAAACTCGACAATGCCCATGCTTTGCTGCAAATAGGGAATGTGATCCAGATATTTGTAAGAATTGTTGGGTCAGTTGTGGTGATGGTACCCTTGGGTTTCCTGTCCAAAGAGGCAATAATTATGAATGCCGAAATATGAAGTTTCTTCTCAGACAGCAGCGAAGGATTCTTCTTGGAAAGTCTGATGTACATGGCTGGGGAGCCTTCTTAAAGCATGTTCTCGATGCTCAACGGCTGGGTAACAAATTGAAGTTCGCTAATCATTCTACTCATCCAAATTGCTATGCAAAGGTTGTTACGGTTGCTGGAGACTATCGGGTAGGCATTTTTGCATCGGAGCGGATTGCTGCAGGGGAGGAAATATTCTATGATTATGGATTTGCACCAGAGTGCAAACCAGAGTGGGTCTGTAAGCTTAAGGAACCAGCATCAAAAAAAGAGCGCGGCCCTTCATCAAGTCGTGGCCCTTCATCAAGTCGTCGTGCAAAGAAGAATGCTTAA 2433 0.4159 MNDVTFMEKKSVKVTIAQTTFPTLQQVLLLIDSLKNRVHADRFISIERRVEENRQKLAGLTDNLFEISKERSTGSFTRTQRSPDLLAKRQQDAIDANNGGRERTGDHEDSLGCTAVLHKYNAPAPDKSLVVTIMLPKIRRIPKYSTWLFLDRNELTTKDQSVEGRPQIYYDKDGGETLICSDSEEEMPVEEEEKRDFIQSEDFILWTIKQLGLCDLVLESLSHLFSRDASEIKERYETLSNKENAASGSNTGDTEENFQSGNLHMEKDIGAAQASFDNLFCRRCLAFVCRLHGCSQDVVLPAEKQTTWIPPDVENAPCGPNCFLLVLKSENFAKVTSSSQADVEENCSGDVEVQMLSQMSSDISASKQINCSKTVSASSNAKNIYESSGSENAHVQDTVSPSKSVNNDGIIKTNSKRLAEHVLVFMQKRQKKAAISDSNDIGEGLGCSSNKMGTNSPIISSEDNMTKEEFVHEKNCQQEFTDNESWKPLEKGLLYQGMEMFGRNSCLIARNLLSGLKTCWEIYQYMNCNEGKMSGPIGDAPNSPLEDYSKGNNKVSRRPRSVRRRGKFGRLRFTWKSATYRSNRKRVTEGTGQFYKHYNPCDCQPACGKECPCCENGIYCEKYCGCPESCKNRFRGCRCAKNQCQTRQCPCFAANRECDPDICKNCWVSCGDGTLGFPVQRGNNYECRNMKFLLRQQRRILLGKSDVHGWGAFLKHVLDAQRLGNKLKFANHSTHPNCYAKVVTVAGDYRVGIFASERIAAGEEIFYDYGFAPECKPEWVCKLKEPASKKERGPSSSRGPSSSRRAKKNA 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0193 810 MobiDBLite consensus disorder prediction 541 561 - -
Lal23g0193 810 SMART CXC_2 632 669 IPR033467 -
Lal23g0193 810 Gene3D SET domain 717 808 IPR046341 -
Lal23g0193 810 ProSiteProfiles SET domain profile. 632 770 IPR001214 GO:0005515
Lal23g0193 810 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 25 447 - -
Lal23g0193 810 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 716 798 - -
Lal23g0193 810 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 442 716 - -
Lal23g0193 810 MobiDBLite consensus disorder prediction 241 259 - -
Lal23g0193 810 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 25 447 IPR045318 GO:0006338|GO:0018024
Lal23g0193 810 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 716 798 IPR045318 GO:0006338|GO:0018024
Lal23g0193 810 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 442 716 IPR045318 GO:0006338|GO:0018024
Lal23g0193 810 Pfam CXC domain 636 667 IPR041355 -
Lal23g0193 810 ProSiteProfiles CXC domain profile. 579 683 IPR026489 -
Lal23g0193 810 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 31 810 IPR025778 GO:0031519
Lal23g0193 810 MobiDBLite consensus disorder prediction 386 408 - -
Lal23g0193 810 MobiDBLite consensus disorder prediction 240 259 - -
Lal23g0193 810 SUPERFAMILY SET domain 579 774 IPR046341 -
Lal23g0193 810 MobiDBLite consensus disorder prediction 786 810 - -
Lal23g0193 810 Pfam SET domain 716 770 IPR001214 GO:0005515
Lal23g0193 810 SMART set_7 698 776 IPR001214 GO:0005515
Lal23g0193 810 Gene3D SET domain 598 716 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0193 Lal-Chr23 1741461 1751258 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal23g0193 SET 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0193 - K11430 gmx:100799832 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0193 23 1741461 1751258 Lal23g0193 23 1741461 1751258 ECH
Lal16g0224 16 1339040 1348638 Lal23g0193 23 1741461 1751258 LSH
Lal15g0172 15 1208185 1216513 Lal23g0193 23 1741461 1751258 LSH