Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0181 ATGGCAACTCTTCTCTGCAACAAAATTCAACACTTTCACTTCACACTTATTTTTCTTATCCAATTATCATTACTACAATTCATCTCATCAAGTTACACTATCCCAAACAAGTACTTCATCAATTGTGGCTCAAATAACAATGTTACAGAACCAGAAACTAACCATGTTTTTGTTGCAGAATCATATTCTGAAGCTAGTTTTAGCAGCAGAAGCAAAATATATACTAACCAATCTTTTGTACCTTCTCCTCTTTACAAAACAGCTAGGATTTTCACTCAAACACATTCTTGGTATGGCTTCAACATAGAAACAACAGGCACTTACATGCTGCGCCTTCATTTCCTCGCTTTCGCTTCGTCAACAAGCAATCTTTCTTCAGCTAAGTTCAATGTTTCAGTGCCTAATTTCTGGCTGCTACGAAATTTCGATGCTCGAAATTATACTAACATGGCTTTAGTAAAAGAGTTTTTATTGCATATCCCTATTGGAAACTTCAAAATCACTTTCACCCCTTTGTTACAATCATTTGCCTTTGTGAATGCTATAGAATTCTTCATACTCCCCCTCCATTTTATATCAGATAATGTTGCAATTTTTAGTTACGGTACTAATCGCGGCTTAACTACTTACCCTAGTACTACTATGCAGGCACAAATGTTGGAGACTATACACAGGATTAATGTTGGTGGTGAAAATGTAACAAGGGGTATTGATAATTTATGGAGAAACTGGCTTTCGGATGATGGTTATCTTTTAAATCGCGAAAACGCGAAGAATAGTACCCCATATAATAGTTCAATCAAATACCATGTTGGTGATGATTCTAAGGGTCCATATTCTAATAAGTTTATTGCACCAAATGCTGTGTACCAAACTGCTAAACAAATTATAAGTAATAGCTCCAATTTAAACATAACTTGGAGCTTTCCGGTCGATAAGGATACCGATCATTTTATTCGACTTCATTTCTGTGACATTTGGAGTTCAAATATTGGTCTTGCATATTTCAGTCTATACATTTATGACAACTATGTTATTGAGATAAATAAGAACATTGATGGAGATGTGTTGGCACCATTGCATTCTCCTTATTATTATGATTATGTTGTTCACTCTGATAATTCTGGTGTAATGAAGATCAGTGTAGGGCCTGATAAAACTGCAAAGGAAATAAGTGCTTTTTTAAATGGGGTAGAAATAATGAAGTTGAGTAATTCATCAGATTCTGTACCCTTGGATGGTGAACATAAGCATAAGTATAATCATCTTGCTGTGGTTATAGGTGCAGTTCTTGGTGGTTTTGTTCTGGTTTGTGTGGTGGTAGTGGGATTTCTTTGGCGTCTTAAAACGAGGAAACAAAAGGCGGTTGAGAATTCGGATTGGTTACCGATTCATGTCACTGCATTAGGGAGTTCTCATTGTAGATTGACTGAAGGCTCCCCTCATCCGAACATTAATCTTGGACTTAAGATTTCATTGATTGACATTCAATTCGCTACGAATAATTTCGATGCCAAAGAGATAATCGGCAAGGGAGGTTTTGGCAATGTCTATAAGGGAGTTCTTAAGAATGGGATGAAAGTGGCTGCGAAAAGAAGTGAGCCAGGGTCAGGTCAAGGCCTTCCCGAGTTTCAGACCGAGATCATGGTTTTGTCCAAGATTCGTCATAGGCACCTTGTTTCGTTGATCGGTTATTGCGACGAAAGGAATGAGATGATACTGGTTTATGAGTACATGGAAAAAGGGACAGTTAGAGATCATTTGTACAACACAAATTCACCAACCTTGTCTTGGATGCAAAGGCTTGAAATTTGCATTGGAGCTGCAAGAGGCCTTCATTACCTTCACAAAGGAGCATCCGGGGGAATCATTCACCGCGATGTGAAGTCGTCTAACATATTGCTTGATGAGAACTATGTTGCTAAAGTGGCTGATTTCGGCCTTTCGAAAACAGGCCCTCTTGATGATAATCAATCATATATTAGCACAGGTGTTAAAGGCACTTTCGGCTATCTCGATCCCGAGTATTTCATGTCACAACAGCTTACAGAAAAATCCGATGTATATTCATTTGGTGTGGTTCTTCTAGAAGTGTTATGTGCAAGATCAGCTATTGATCCTTTGCTTCCAAGGGACCAAGCTAACTTGGCTGAATGGGGAATCCTTTGTAAAAACAAGGGGATACTAGAAGATATCATTGACCCTTCCATCAATGGCCAGATAAATCCAAACTCGCTCCGAAAATTTAGCGAAACATTCGAGAAATGCTTGCAAGAAGATGGTTGTGATAGGCCAACCATGAGTGATGTGCTGTGGGACTTAGAGTATGTATTGCAGCTTCAGCGCGGCGCGGTACATCGAGAGCCTCATGAGGATAGTTCTAGTAGCACTTCTGCATCACTCCTATTGCATAATGCGAGACTTCTTCCTTCGCTTTCGGCACTAAGCGAAGTCGATGACATGTCTATTGTCAAGGCTGATGAATCTGATAGTGCAGCAGATTAG 2505 0.3908 MATLLCNKIQHFHFTLIFLIQLSLLQFISSSYTIPNKYFINCGSNNNVTEPETNHVFVAESYSEASFSSRSKIYTNQSFVPSPLYKTARIFTQTHSWYGFNIETTGTYMLRLHFLAFASSTSNLSSAKFNVSVPNFWLLRNFDARNYTNMALVKEFLLHIPIGNFKITFTPLLQSFAFVNAIEFFILPLHFISDNVAIFSYGTNRGLTTYPSTTMQAQMLETIHRINVGGENVTRGIDNLWRNWLSDDGYLLNRENAKNSTPYNSSIKYHVGDDSKGPYSNKFIAPNAVYQTAKQIISNSSNLNITWSFPVDKDTDHFIRLHFCDIWSSNIGLAYFSLYIYDNYVIEINKNIDGDVLAPLHSPYYYDYVVHSDNSGVMKISVGPDKTAKEISAFLNGVEIMKLSNSSDSVPLDGEHKHKYNHLAVVIGAVLGGFVLVCVVVVGFLWRLKTRKQKAVENSDWLPIHVTALGSSHCRLTEGSPHPNINLGLKISLIDIQFATNNFDAKEIIGKGGFGNVYKGVLKNGMKVAAKRSEPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERNEMILVYEYMEKGTVRDHLYNTNSPTLSWMQRLEICIGAARGLHYLHKGASGGIIHRDVKSSNILLDENYVAKVADFGLSKTGPLDDNQSYISTGVKGTFGYLDPEYFMSQQLTEKSDVYSFGVVLLEVLCARSAIDPLLPRDQANLAEWGILCKNKGILEDIIDPSINGQINPNSLRKFSETFEKCLQEDGCDRPTMSDVLWDLEYVLQLQRGAVHREPHEDSSSSTSASLLLHNARLLPSLSALSEVDDMSIVKADESDSAAD 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0181 834 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Lal23g0181 834 SUPERFAMILY Protein kinase-like (PK-like) 485 776 IPR011009 -
Lal23g0181 834 SMART serkin_6 503 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0181 834 Pfam Protein tyrosine and serine/threonine kinase 506 771 IPR001245 GO:0004672|GO:0006468
Lal23g0181 834 CDD STKc_IRAK 509 775 - -
Lal23g0181 834 Gene3D Transferase(Phosphotransferase) domain 1 579 798 - -
Lal23g0181 834 Gene3D Phosphorylase Kinase; domain 1 476 578 - -
Lal23g0181 834 Gene3D - 219 405 - -
Lal23g0181 834 Gene3D - 36 186 - -
Lal23g0181 834 Pfam Malectin-like domain 40 402 IPR024788 -
Lal23g0181 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Lal23g0181 834 PANTHER OS07G0166700 PROTEIN 29 795 IPR045272 GO:0004714|GO:0006468
Lal23g0181 834 ProSiteProfiles Protein kinase domain profile. 503 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0181 834 PANTHER BNAC03G27170D PROTEIN 29 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0181 Lal-Chr23 1551323 1553827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0181 9 794 Receptor kinase-like Gene Family AT3G46290 44.209 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal23g0181 Malectin_like 6.4e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0181 - - adu:107480521 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0181 23 1551323 1553827 Lal23g0181 23 1551323 1553827 ECH
Lal16g1350 16 9861142 9863601 Lal23g0181 23 1551323 1553827 LSH