Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0131 ATGGCCATAAGGCCCTTCTTCCAATTCAATTTCTCTCACAATATTCCATTCATCTTTCTCTTCCCTTCTTCTCAATCCCTTCATTCTTTTCATTTTTCTCATTCCTTCAAACCATTTTTCCTCCGCTCCCTCGCTTCTTCCTCCGCCGCACCTCCTCCGCCGCACGCTCACGACCTCCGCCGCCGATTTCGACCTCCGCCCGACACCCTGGCGCAGAAGATTGGGAAATCCACTCGCTGTCCTGGCGCTCCCTCAAAAGCTAGGGTTTATTCTGATGTCAACGTTGTTCGCCCTAAGGAATATTGGGACTATGAAAACCTCACTGTTCAATGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAGGTGGGAAGGGGAAAATATAGTGAGGTGTTTGAGGGTGTTCACCTCACCGATAATGAAAAATGTGTCATCAAGATCCTGAAACCTGTCAAGAAGAAGAAGATCAAGAGGGAAATCAAAGTATTACAGAATCTTTGTGGAGGGCCCAATATTGTAAAGCTGCTTGACATCGTTAGAGATCAGCAGTCGAAGACACCAAGCTTTATATTTGAATATGTTAATAACAACGACTTTAAAGTGCTATATCCTACGTTATTAGACTATGATATACGATATTATATCCATGAACTTCTAAAGTTAGAAACTGATGAAGACTTGAGACGTTGCTGCACAGATTTGGCGAATACTTCTGTCTCAGGTGTAGTGTGGATTATGGATGGAAAATACATTTTGGGTGGAAGGCTTATATTGCAAATAGTGCTTGCTAAAGACACTGCATCTGCATATGACTGCTTACGTGTCCTTCCTGTTTCCTTATTGAGATATTTAGTTAATGCATGCTCATATATCCTGGCGCTGGATTATTGCCACTCACAAGGAATCATGCATCGGGATGTAAAGCCACATAATGTGATGATTGATCATAGTCAGCGTAAACTTCGCCTTATAGATTGGGGTCTTGCTGAGTTCTATCATCCCGGGCAAGAATATAATGTCCGCGTTGCCTCAAGATATTTCAAAGGTCCTGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCACTTGATTTATGGAGTCTTGGTTGTATGTTCGCGGGGATGATATTCCGTAAGGAGCCATTCTTCTATGGACACGATAATTATGATCAACTGGTCAAAATAGCTAAGGTTCTCGGAACAGACGAACTAAATGCATATTTGAATAAATATCGCATAGAGTTGGACCCACATCTTGAAGCACTTGTGGGAAGATTACACTCCAATATTGGGACAGGCATAGCCGGAAGCCATGGACAAAGTTCATTACCGTGGAAAATAAACACTTGGCGGTTCCCGAGGCCATTGACTTTGTTGACAAGTTACTACGGTATGATCACCAAGAACGACCAACTGCAAAAGAAGCAATGGCCCATCCTTATTTCAATCCAGTCAGAAACGCAGGAAGTAGCAGAACTCGTGCACATTGAGTTGCTGATGCTTGTTCTCGGTTTGAGCCCTTTTACGTGGCTGAACTTCGAATTCTTGTGGAACTTGCTTTTAGGAGATTCTCCTCCTATTTTGTTGTAA 1590 0.4296 MAIRPFFQFNFSHNIPFIFLFPSSQSLHSFHFSHSFKPFFLRSLASSSAAPPPPHAHDLRRRFRPPPDTLAQKIGKSTRCPGAPSKARVYSDVNVVRPKEYWDYENLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHLTDNEKCVIKILKPVKKKKIKREIKVLQNLCGGPNIVKLLDIVRDQQSKTPSFIFEYVNNNDFKVLYPTLLDYDIRYYIHELLKLETDEDLRRCCTDLANTSVSGVVWIMDGKYILGGRLILQIVLAKDTASAYDCLRVLPVSLLRYLVNACSYILALDYCHSQGIMHRDVKPHNVMIDHSQRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNKYRIELDPHLEALVGRLHSNIGTGIAGSHGQSSLPWKINTWRFPRPLTLLTSYYGMITKNDQLQKKQWPILISIQSETQEVAELVHIELLMLVLGLSPFTWLNFEFLWNLLLGDSPPILL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0131 529 SUPERFAMILY Protein kinase-like (PK-like) 89 415 IPR011009 -
Lal23g0131 529 SMART serkin_6 117 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0131 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
Lal23g0131 529 PANTHER BNAA04G13490D PROTEIN 68 220 - -
Lal23g0131 529 PANTHER BNAA04G13490D PROTEIN 256 427 - -
Lal23g0131 529 Gene3D Transferase(Phosphotransferase) domain 1 290 426 - -
Lal23g0131 529 Pfam Protein kinase domain 291 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0131 529 Pfam Protein kinase domain 117 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0131 529 PANTHER CASEIN KINASE II SUBUNIT ALPHA 68 220 IPR045216 GO:0004674|GO:0006468
Lal23g0131 529 PANTHER CASEIN KINASE II SUBUNIT ALPHA 256 427 IPR045216 GO:0004674|GO:0006468
Lal23g0131 529 Gene3D Phosphorylase Kinase; domain 1 103 193 - -
Lal23g0131 529 CDD STKc_CK2_alpha 98 425 IPR045216 GO:0004674|GO:0006468
Lal23g0131 529 ProSiteProfiles Protein kinase domain profile. 117 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0131 529 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0131 Lal-Chr23 1286877 1292720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0131 293 407 Core Cell Cycle Gene Families AT1G73690 38.793 1.10e-22 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Lal23g0131 Pkinase 1.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0131 K03097 - ppp:112290184 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0131 23 1286877 1292720 Lal23g0131 23 1286877 1292720 ECH
Lal15g1309 15 14982599 14988266 Lal23g0131 23 1286877 1292720 LSH
Lal16g1327 16 9474103 9480985 Lal23g0131 23 1286877 1292720 LSH