Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0130 ATGGTTGAAGAGTTAGCTCCAAAAGTTTCTGTTGTTGTAAGAGAGTTTAACCCTAATAAAGACAGAGAGAAAGTTGAAGGTGTTGAAAGAATATGTGAAGTTGGACCAAGTGGTAAAATTTCTCTCTTCACTGATCTCCATGGTGATCCTATTTGCAGGATTAGAAACTCACCCACTTTCAACATGCTGGTGGCAGAGATAGATGAAGAGATTGTAGGAATGATAAGAGGTTGCATCAAAACCGTTACTTGTGGCAAAAAACAACTCAACAGAAAAAACAACAATGATACTGATCCAACCAAACATGTCCCTATTTACACTAAAGTTGCATACATACTAGGCCTTCGTGTTTCACCATCTCACAGGAGAATTAGAATTGGGTTGAAGTTGGTTCAAACAATGGAGCAATGGTTCAAGGACAATGGTGCTGAGTATTCATACATAGCAACTGAAAATGATAACGTTGCATCCGTTAATCTTTTCACACAAAAATGTGGCTATTCAAAGTTCAGAACTCCTTCAATTCTCGTGAACCCCGTTTTTGGTCATAAAGTAAAAACTTTATCAAACAAATACACTATAATTAAACTCAATCAAAACGACGCCGAATTACTCTATCGAAACCGTTTCTCAACCACTGAGTTTTTTCCTCGTGACATTGACTCTGTCCTTAAAAACAATCTTAGTCTTGGTACCTTTGTTGCTGTTCCTCGTGGTTCATATGAATTTGACACGTGGCCCGGTTCAGACCGGTTTTTATTAAACCCACCAGAGTCTTGGGCTGTGGTTAGTGTTTGGAATTGTAAGGATGTGTTTACGCTTGTGGTTCGTGGTGTTTCTATTGTTAAGAGAATGTTTTCAAAGTTGACTCGTGTCTTGGACCGGACTATGCCTTGGCTTAAATTACCTTCGGTTCCGAACTTTTTTAAACCGTTTGGTTTGCATTTTATGTATGGGCTTGGTGGCGATGGACCGGATTCGGTTCAAATGGTTCGAGCTTTGTGTGGGTTTGCTCATAATTTGGCTAAAGAGAGTGGTTGTAGTGTTGTTGCTACTGAAGTTTCTAGCCTTGAACCACTTCGGTTTGGAGTGCCACATTGGAAAATGTTGTCTTGTGAGGAAGATTTGTGGTGTATCAAGAGGCTTGGTGAAGATTATAGTGATGGTTCGGTTGGTGATTGGACTAAATCTCCACCTTGTTTTTCTATTTTTGTTGACCCAAGAGAGTTCTAA 1233 0.3958 MVEELAPKVSVVVREFNPNKDREKVEGVERICEVGPSGKISLFTDLHGDPICRIRNSPTFNMLVAEIDEEIVGMIRGCIKTVTCGKKQLNRKNNNDTDPTKHVPIYTKVAYILGLRVSPSHRRIRIGLKLVQTMEQWFKDNGAEYSYIATENDNVASVNLFTQKCGYSKFRTPSILVNPVFGHKVKTLSNKYTIIKLNQNDAELLYRNRFSTTEFFPRDIDSVLKNNLSLGTFVAVPRGSYEFDTWPGSDRFLLNPPESWAVVSVWNCKDVFTLVVRGVSIVKRMFSKLTRVLDRTMPWLKLPSVPNFFKPFGLHFMYGLGGDGPDSVQMVRALCGFAHNLAKESGCSVVATEVSSLEPLRFGVPHWKMLSCEEDLWCIKRLGEDYSDGSVGDWTKSPPCFSIFVDPREF 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0130 410 Gene3D - 47 173 - -
Lal23g0130 410 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 195 IPR000182 GO:0016407
Lal23g0130 410 PANTHER N-ACETYLTRANSFERASE 5 410 - -
Lal23g0130 410 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 51 170 IPR016181 -
Lal23g0130 410 CDD NAT_SF 62 145 - -
Lal23g0130 410 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 5 410 - -
Lal23g0130 410 Pfam Acetyltransferase (GNAT) family 61 167 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0130 Lal-Chr23 1254762 1256838 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lal23g0130 Acetyltransf_1 1.3e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0130 - - gmx:100775317 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0130 23 1254762 1256838 Lal23g0130 23 1254762 1256838 ECH
Lal16g0252 16 1507699 1509923 Lal23g0130 23 1254762 1256838 LSH
Lal16g1326 16 9431126 9434888 Lal23g0130 23 1254762 1256838 LSH
Lal16g0252 16 1507699 1509923 Lal23g0130 23 1254762 1256838 PCT
Lal23g0130 23 1254762 1256838 Lal16g1326 16 9431126 9434888 PCT
Lal23g0130 23 1254762 1256838 Lal23g0130 23 1254762 1256838 PCT
Lal16g1326 16 9431126 9434888 Lal23g0130 23 1254762 1256838 PCT
Lal23g0130 23 1254762 1256838 Lal16g0252 16 1507699 1509923 PCT