Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0112 ATGGATTCTTCAAGAACTTCAACTCTTGCTCTATTATTCTCCATCAATTTGCTTTTCTTTGTCTTAGCTAGTGGGTGCTATAGTTGTACACAGCCAAAACAAAACCCTAACCCTAACCCTAACACATTACCTTTTCCAAACCAAAGTGATAAGAGTTGTCCCAGAGATGCATTGAAACTAGGAGTTTGTGCAAATGTTCTTAATACACCAATTGGTGCATTGGTGGGGTCACCATTAAACCACCCATGTTGTTCAATACTAGAAGGGCTTCTTGATCTTGAAGTTGCTCTTTGTCTTTGTACTGCTATCAAAGCAAACATTCTTGGAATTAACATTAATATTCCCATTTCACTAAGCTTGCTCCTTAATTACTGTGACAAGACACCACCCTCTGAGTTTCAATGCTCCTAA 411 0.3844 MDSSRTSTLALLFSINLLFFVLASGCYSCTQPKQNPNPNPNTLPFPNQSDKSCPRDALKLGVCANVLNTPIGALVGSPLNHPCCSILEGLLDLEVALCLCTAIKANILGININIPISLSLLLNYCDKTPPSEFQCS 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0112 136 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Lal23g0112 136 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 7 135 - -
Lal23g0112 136 SMART aai_6 53 135 IPR016140 -
Lal23g0112 136 PANTHER - 7 135 - -
Lal23g0112 136 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 55 135 IPR036312 -
Lal23g0112 136 Pfam Hydrophobic seed protein 53 136 IPR027923 -
Lal23g0112 136 CDD HPS_like 52 135 IPR027923 -
Lal23g0112 136 Gene3D - 51 136 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0112 Lal-Chr23 1108739 1109149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0112 44 135 Acyl Lipid Metabolism Gene Families AT4G22490 35.870 2.51e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0112 - - var:108336118 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0106 15 732880 737837 Lal23g0112 23 1108739 1109149 PCT
Lal23g1457 23 14939948 14945146 Lal23g0112 23 1108739 1109149 PCT
Lal23g0112 23 1108739 1109149 Lal15g0106 15 732880 737837 PCT
Lal23g0112 23 1108739 1109149 Lal23g1457 23 14939948 14945146 PCT