Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0105 ATGGTATTAAGTTTAATGAAGTTTCTAACCGCCTGCTTGTGGCGACGACAACAACGATCGGCTTCTTCATCATCATCGGATCGAAAGGGTTCGGATGTTACCGGCCGTAAAGAAGGACTGCTTTGGTATAAGGATGTTGGGCAACACTTGTTTGGTGAATACTCAATGGCTGTTGTTCAGGCCAATAATTTGCTTGAAGATCAGAGCCAGATTGAGTCTGGTTCTCTTACTTTGCTTCATGATGGCCCTTATGCTACATTTATCGGTGTCTATGATGGTCATGGTGGACCCGAAACTTCCCGCTACATTTATGATAACCTCTTCCAGCATCTAAAAAGATTTGCATCTGAGCACAAGTCTATGTCCGTGGAGGTTATTCGCAAGGCATACCAAGCTACGGAAGAAGGTTTTCTGTCGGTGGTTACCAAACACTGGCCTGTGAATCCCCAAATTGCTGCTGTGGGATCTTGTTGTTTGGTTGGAGTGATTTGTGGTGGTACCCTCTATATTGCTAACCTTGGTGATTCCCGTGCCGTGCTTGGACGGGTTGTCAGAGCAACTGGTGAGGTTCTGGCAATCCAACTCTCGTCAGAGCATAATGTGGCCATAGAATCTGTGAGACAAGAGATGCATTCTCTGCATCCGGATGACTCGAAAATTGTAGTTCTGAAGCACAACGTATGGCGGGTGAAGGGTCTGATACAGGCTTTCTTTAAGGCAAACCTGTACGTGGCACGCGGTACAACGTATTTGGTTTCTAGATCCATTGGTGATGCATACCTTAAAAAGGCAGAATTTAACAAGGAACCGTTGTATACTAAGTTTCGTCTTCGGGAAACTTTTAAGACGCCAATTTTGAGCTCTGACCCATCAATTTCTGTTCACGAACTTCAAGAACATGATCAATTTCTCATATTTGCGTCTGATGGTCTTTGGGAACACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAATCACCCACACAATGTCATGCTAATGTACTCTTTTCATGTAGAAGGTACAGATTACAGGCTTGGAAGTGAAAATGAAGAGGCTGGAATTGCTCGGAGGCTCATCAAAGCTGCTTTGCAGGAAGCAGCGAAGAAACGAGAGATGAGGTACTCCGATTTGAAGAAGATTGACCGCGGTGTACGCCGTCATTTCCACGATGACATCACAGTTGTAGTTGTATTTCTTGATTCCAACCTTGTGAGCAGAGCCAGCTCAGTAAGAGGACCTCCCTTATCGGTAAGGGGAGGTGGCATTCCCGTACCTTCAAGAACCTTGTCTCCCTTTGCTGATCCTACGGAAACTTAG 1320 0.4515 MVLSLMKFLTACLWRRQQRSASSSSSDRKGSDVTGRKEGLLWYKDVGQHLFGEYSMAVVQANNLLEDQSQIESGSLTLLHDGPYATFIGVYDGHGGPETSRYIYDNLFQHLKRFASEHKSMSVEVIRKAYQATEEGFLSVVTKHWPVNPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVRATGEVLAIQLSSEHNVAIESVRQEMHSLHPDDSKIVVLKHNVWRVKGLIQAFFKANLYVARGTTYLVSRSIGDAYLKKAEFNKEPLYTKFRLRETFKTPILSSDPSISVHELQEHDQFLIFASDGLWEHLSNQDAVDIVQNHPHNVMLMYSFHVEGTDYRLGSENEEAGIARRLIKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASSVRGPPLSVRGGGIPVPSRTLSPFADPTET 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0105 439 ProSiteProfiles PPM-type phosphatase domain profile. 50 400 IPR001932 -
Lal23g0105 439 PANTHER ALPHABET, ISOFORM E-RELATED 5 430 - -
Lal23g0105 439 MobiDBLite consensus disorder prediction 419 439 - -
Lal23g0105 439 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 430 - -
Lal23g0105 439 CDD PP2Cc 51 400 IPR001932 -
Lal23g0105 439 SUPERFAMILY PP2C-like 61 401 IPR036457 -
Lal23g0105 439 Gene3D - 23 410 IPR036457 -
Lal23g0105 439 SMART PP2C_4 43 398 IPR001932 -
Lal23g0105 439 Pfam Protein phosphatase 2C 86 329 IPR001932 -
Lal23g0105 439 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0105 Lal-Chr23 1036422 1043685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0105 1 428 PP2C-type Phosphatase Gene Family AT3G51370 68.458 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0105 K01102 - gmx:100777920 676.781