Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0093 ATGAAGAGCAAAAGAATGAGACAATGGGTAAACCTTCTAGATTTTGCACTGCTATTGCTACTGGCACAAGGATCTTATGTTCCAATCACTATTGTTAATGATGCAGTATCAAAAGGAGCAGCCTTGCCCACCAAGCAGAGAGGCTATTTTCAGTTTACCCGACTATTGGGTATTGAAAAAGAGCAATTTGATGCACGAGACTTTTACTTAATAGGGTCTGTAAATGCCGGATTTTGTTTGGATGGGAGTCCACCAGCATACCACTTTGCTAAGGGAACTGGAGAAGGAATTAACAACTGGATTGTTCACATTGAGGGTGGAGGATGGTGCAGCGATGTCACGTCTTGCCTGTGGCGTAAGGACAGTCGTTTAGGTTCATCAAAGAAAATGGAGGAGCAACTTTACTTTTCGGGACTTTTAAGTGACACAGAAAATCTCAATCCGGATTTCTACAATTGGAACAGAGTCAAGATTAGGTACTGTGATGGAGGGTCATTTACTGGCGATGTGGAAAAAGTTGATCCGGGAAACAATTTGCACTTCAGAGGAGCAAGGATTTTCGTTGCTGTTATTGACGAATTACTAGCGAAAGGAATGAAAAATGCCGAAAATGCTCTTCTATCTGGATGCTCAGCAGGAGGGTTGGCTTCTATATTACATTGCGATCGCTTTAAAGCTCTATTACCAGAGGGAACTACGGTTAAATGCCTTTCGGATGCTGGTTATTTTGTCGATGTAAAGGATATCTCGGGTGCAAAACGCATTGAAGAGTTCTATGGTCAAGTTGTTGAAACCCATGGCTCAGCAAAGCATTTACCCGGATCATGCACTTCAAGACTAAGTCCAGGGCTGTGCTTTTTCCCGGAACACGTGATATCAGAAATCGATGCACCAATCTTCATCGTAAACACGGCCTATGACCCATGGCAGATTCAAAACATTTTGGCACCCGGTGTTGCCGATCCAGGTGGTTCTTGGCAAAGTTGTGACCTTGATATAAAAAGATGCACACCTGATCAACTAAGTGTAGTGCAAGAATTCAGAACAGAATTCCTAAAGGCATTGAGTCCTCTAGGAAAATCTCCATCTAGAGGAATGTTCATAGACTCTTGCTATATCCACTGTCAAACAGAAACACAAGAAACATGGTTTCACAATAATGCTCCACTACTATCCAATTCAACAATTTCAAAAGCTGTAGGAGACTGGTTTTATGAAAGAAGTGATTCCAATCAGAAAATAGATTGTAGTTACCCTTGCAACCCTACATGTCATAGCAGTGTTTTTGATGCAAGAAAGTACCCAGGGATATTCCTTTAA 1320 0.4174 MKSKRMRQWVNLLDFALLLLLAQGSYVPITIVNDAVSKGAALPTKQRGYFQFTRLLGIEKEQFDARDFYLIGSVNAGFCLDGSPPAYHFAKGTGEGINNWIVHIEGGGWCSDVTSCLWRKDSRLGSSKKMEEQLYFSGLLSDTENLNPDFYNWNRVKIRYCDGGSFTGDVEKVDPGNNLHFRGARIFVAVIDELLAKGMKNAENALLSGCSAGGLASILHCDRFKALLPEGTTVKCLSDAGYFVDVKDISGAKRIEEFYGQVVETHGSAKHLPGSCTSRLSPGLCFFPEHVISEIDAPIFIVNTAYDPWQIQNILAPGVADPGGSWQSCDLDIKRCTPDQLSVVQEFRTEFLKALSPLGKSPSRGMFIDSCYIHCQTETQETWFHNNAPLLSNSTISKAVGDWFYERSDSNQKIDCSYPCNPTCHSSVFDARKYPGIFL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0093 439 PANTHER NOTUM-RELATED 4 42 IPR004963 GO:0016787
Lal23g0093 439 PANTHER NOTUM-RELATED 77 433 IPR004963 GO:0016787
Lal23g0093 439 Pfam Pectinacetylesterase 67 408 IPR004963 GO:0016787
Lal23g0093 439 SUPERFAMILY alpha/beta-Hydrolases 181 309 IPR029058 -
Lal23g0093 439 PANTHER PECTIN ACETYLESTERASE 4 42 - -
Lal23g0093 439 PANTHER PECTIN ACETYLESTERASE 77 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0093 Lal-Chr23 910731 914319 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0093 5 437 Carbohydrate Esterase AT4G19420 52.564 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0093 K19882 - cit:102628021 564.688