Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0092 ATGGGAAACATAAGAATGAAGCAATGTTTAAGCCTTATAATATGTGTACTGCTATTGCTAAAGGCAGAAGGGATTTCTGTATCGATCAGTTTCGTTGAAAACGCAGTAGCAAAAGGAGCTGTTTGTTTGGATGGAAGTCCGCCAGCTTACCACTTCGATAAGGGATTCGGAGCAGGGATAAACAACTGGATAGTTCATGTTGAGGGAGGAGGTTGGTGCAACAATGTCACTACTTGTCTTGCCCGCAAGGATACTCGTTTAGGCTCATCCAAGAAAATGGATGGTGTAGTTTCCTTTTCTGGGTTTTTCAGTAACAAGCAAAAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGGTACTGTGACGGGGCATCATTTACTGGTGATATCGAAGCAGTCGATCCGACAACCAATTTGCACTTCAGAGGAGCAAGGATTTTTGTTGCTGTCATTGAGGAGTTACTAGCAAAAGGAATGAAAAATGCTCAAAACGTTATTTTCTCTGGATGTTCAGCTGGAGGATTGACTACTATACTACTTTGCGATCGCTTTAGATCTCTGTTACCTACAGGAGCTAAAGTGAAATGTCTTTCCGATGCCGGTTATTTTATCAACGTAAAGGATGTCTCCGGAGCAGCACACATTGAAGAATTCTACAGCCAAGTTGTTAAAACACATGGGTCAGCAAAGAATTTGCCTCTATCATGCACTTCAAGACTCAGTCCAGGATTGTGCTTTTTCCCACAAAATGTTGCTTCACAAATCAACACACCAATCTTCTTTATAAATGCGGCTTATGACTCGTGGCAGATTAAGAACATCTTGGCACCGGGTGTTGCCGACCCCCATGGCCAATGGCATGACTGCAAGCTTGATATAAAGAAATGCTCACCTTCTCAACTAAGTATTATGCAAGGGTTTAGGAATGAGTTCATGAAGGCGTTGACTGCAGTAGGCAACTCTGCATCTAAAGGAACATTCATAGATGCTTGCTATGCCCACTGTCAAACCGGAATGCAGGAGACATGGTTGAGAAATGACTCTCCTTTGCTTGCTGATACAACAATAGCAAAGGCTGTTGGAGACTGGTTTTATGACAGAAAGCCTTTTCATGAGACAGATTGCACTTACCCTTGCAACCCAACTTGTCATAACCGTGTATTTGATGACAACAACTTTGGAGTATAG 1197 0.4211 MGNIRMKQCLSLIICVLLLLKAEGISVSISFVENAVAKGAVCLDGSPPAYHFDKGFGAGINNWIVHVEGGGWCNNVTTCLARKDTRLGSSKKMDGVVSFSGFFSNKQKFNPDFYNWNRIKVRYCDGASFTGDIEAVDPTTNLHFRGARIFVAVIEELLAKGMKNAQNVIFSGCSAGGLTTILLCDRFRSLLPTGAKVKCLSDAGYFINVKDVSGAAHIEEFYSQVVKTHGSAKNLPLSCTSRLSPGLCFFPQNVASQINTPIFFINAAYDSWQIKNILAPGVADPHGQWHDCKLDIKKCSPSQLSIMQGFRNEFMKALTAVGNSASKGTFIDACYAHCQTGMQETWLRNDSPLLADTTIAKAVGDWFYDRKPFHETDCTYPCNPTCHNRVFDDNNFGV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0092 398 PANTHER NOTUM-RELATED 3 394 IPR004963 GO:0016787
Lal23g0092 398 Pfam Pectinacetylesterase 21 372 IPR004963 GO:0016787
Lal23g0092 398 SUPERFAMILY alpha/beta-Hydrolases 141 272 IPR029058 -
Lal23g0092 398 PANTHER PECTIN ACETYLESTERASE 3 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0092 Lal-Chr23 881554 886477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0092 5 391 Carbohydrate Esterase AT4G19420 59.716 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0092 K19882 - gmx:100781246 681.019