Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0089 ATGGATTCTAGTGAGAATGAGCGTGTGACGGTTCGAGAATTCTGTGCAAATGGAACATTCTTGGTTACAACAGAAATTGAGGCCAAGCTTGATGAAGGAAACATTCAAGAAGCAGAATCGGCATTGCGAGAAGGGTTGTCACTCAATCATGAGGAAGCAAGATCTCTTCTCGGAAAGTTAGAGTATCAAAGAGGTAATGTTGAAGGTGCACTTCGTGTTTTCGATGGGATTGATCTGCAAGCGGCTATACAGCGACTCCAGTCTTCCCTTTCTGAAAAGTCACCGGTCAAGAAAGGTTCCGTTCGCACTGAATCACCTTCTTCGGTCTCTCAGCATGCTGCTAGTTTGGTGCTTGAAGCCATCTACTTAAAATCCAAATCTCTACAAAAACTGGGAAAATTTACTGAAGCTGCTAATGAATGCAAGCGTGTTCTTGATGCTGTTGAGAACATATTTTATCAGGGTGTACCCGATATTCACGTGGACAATAAATTGCAAGAGATAGTAAGCCATGCAGTAGAGCTGCTTCCAGAGCTTTGGAAATATGCCGGTTGCTATCATGAGGCAATGTCTGCTTATAGGCATGGACTTCTTAGTCAGTGGAACCTTGATAATGACTTCTGTGCAAGAATTCAGAAAGCCTTTGCTGTGTTTTTGCTCTACAGTGGGGTGGAGGCAAGTCCACCTAGTTTAGCTGTTCAGGTTGAGGGATCTTACGTGCCGAAAAATAATCTGGAAGAGGCGATTCTGCTTCTAATGATTCTTTTACAAAAGTTTAGCCTTGGTAAGATAAAATGGGATCCTTCAATTATGGAACACCTGACGTTTGCTCTTTCAGCATGTGGCCAAACTTCTTTAGTAGCAAAACAACTTGAGGAGTTGCTTCCTGGTGTATATCATCGTATTGACCGTTGGAATTCTTTAGCTTTATGTCATAGTGGTGCTGGACAAAACATAAGTGCTTTGAATCTTCTTAGGAAATCTTTGCACAAACATGAACGACCGGATGACCTTATATCGTTGTTATTGGCTGCCAGGCTTTGCAGCGAGGATCCTCATCTTGCTGCCGAGGGGGCAGGCTATGCACAGAGGGCAATTAACAATGCTCACGGCCAGCATGAGCATTTAAAAGGTGTGGCTCTTCGGATGTTGGGACTCTGCCTGGGAAAGCAAGCTATGGTTGCTTCCTCGGACTACGAGAGGTCTCATCTTCAGTCCAAAGCTCTGCAATCATTGGAGGAGGCAGCTAGAATGGAGCGAAACAACTCTGATCTAATTTTTGAGTTGGCTGTTCAATACGCAAAGCACCGAAATTTGACTGCTGCGTTACGCTATGCCAAGCAGTTCTTTGACGAAACCGGTGCCTCTGTATTGAAAGGATGGAGATTGCTTGCTCTAGTTTTGTCTTCACAAAAAAGATATTCTGAGGCTGAAGTAGTGACTGATGCTGCTTTAGATGAGACTGTAAAATGGGAACAGGGGCCACTGCTCAGGCTGAAAGCGAAGCTGAAGATCTCCCAATCACGACCAATGGATGCTATCGAAACTTATCGTTACCTTCTTGCATTGGTTCAAGCCCAGAGAAAATCCTTTGGGCATCTCAGAATTTGTTCACAGATTGAGGATGATAAAGTAAATGAATTTGATGTTTGGCATGATTTGGCAAATTTATATGCAAGCCTTTCTCACTGGAAGGATGCTGAAATCTGTTTGCAAAAGGCTAGGGAGTTGAAGGAGTACTCGGCAGCAGTAATACACACCGAAGGCAAGAACCGAACCATTATTTGTTAG 1791 0.4372 MDSSENERVTVREFCANGTFLVTTEIEAKLDEGNIQEAESALREGLSLNHEEARSLLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQSSLSEKSPVKKGSVRTESPSSVSQHAASLVLEAIYLKSKSLQKLGKFTEAANECKRVLDAVENIFYQGVPDIHVDNKLQEIVSHAVELLPELWKYAGCYHEAMSAYRHGLLSQWNLDNDFCARIQKAFAVFLLYSGVEASPPSLAVQVEGSYVPKNNLEEAILLLMILLQKFSLGKIKWDPSIMEHLTFALSACGQTSLVAKQLEELLPGVYHRIDRWNSLALCHSGAGQNISALNLLRKSLHKHERPDDLISLLLAARLCSEDPHLAAEGAGYAQRAINNAHGQHEHLKGVALRMLGLCLGKQAMVASSDYERSHLQSKALQSLEEAARMERNNSDLIFELAVQYAKHRNLTAALRYAKQFFDETGASVLKGWRLLALVLSSQKRYSEAEVVTDAALDETVKWEQGPLLRLKAKLKISQSRPMDAIETYRYLLALVQAQRKSFGHLRICSQIEDDKVNEFDVWHDLANLYASLSHWKDAEICLQKARELKEYSAAVIHTEGKNRTIIC 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0089 596 PANTHER PROTEIN NPG1 1 589 IPR043376 -
Lal23g0089 596 Gene3D Tetratricopeptide repeat domain 453 591 IPR011990 GO:0005515
Lal23g0089 596 SMART tpr_5 548 581 IPR019734 GO:0005515
Lal23g0089 596 SMART tpr_5 118 151 IPR019734 GO:0005515
Lal23g0089 596 SMART tpr_5 458 491 IPR019734 GO:0005515
Lal23g0089 596 SMART tpr_5 302 335 IPR019734 GO:0005515
Lal23g0089 596 Gene3D Tetratricopeptide repeat domain 238 452 IPR011990 GO:0005515
Lal23g0089 596 Gene3D Tetratricopeptide repeat domain 25 200 IPR011990 GO:0005515
Lal23g0089 596 PANTHER CALMODULIN-BINDING PROTEIN 1 589 - -
Lal23g0089 596 SUPERFAMILY TPR-like 406 578 IPR011990 GO:0005515
Lal23g0089 596 SUPERFAMILY TPR-like 31 450 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0089 Lal-Chr23 852105 857032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0089 3 590 Calmodulin-binding Proteins AT2G43040 74.150 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0089 K21843 - gmx:100811897 966.452