Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal23g0086 | ATGAATATTGACACAGGAATTTGGCCAGAATCTCCAAGTTTTAGTGACACCGACATGCCACCAGTGCCAACTAGATGGAAGGGACAATGTCAAACAGGAGAAGCATTCAATGCATCATCATGCAACAGGAAAGTAATTGGAGCAAGATACTACATGAGTGGATATGAAGCAGAAGAAGATTCAGATACAAAAGTGTCATACAAATCTGCTAGAGATAGCAATGGCCATGGAAGCCATACAGCTTCCATAGCTACAGGAAGGTATGTAGCAAACATGAACTATAAGGGTCTTGGAGCTGGAGGAGCAAGAGGAGGTGCACCTATGGCAAGGATTGCAGTGTATAAAACATGTTGGGATTCTGGTTGCTATGATGTTGATTTGTTAGCTGCATTTGATGATGCTATAAGAGATGGTGTTCATATTTTGTCTCTATCTTTGGGTGCTCAATCTCCACAAGGAGATTATTTTAATGATGCAATTTCTGTTGGGTCATTTCATGCTGCTAAACGTGGAGTCATGGTTGTTGCATCAGCTGGGAATGAAGGAATACCTGCTTCTGCTACAAATCTTGCACCATGGATTCTCACTGTTGCTGCCACCTCAACTGATAGAGATTTCACTTCTGATATTGTCTTAGGAAATGGTGCTAAAATCATGGGTGAAAGTCTCAGTCTCTTGGGTATGAATGCCTCCACAAGAATAATTTCTGCTTCTGTAGCCTATGCAGGATATTTTACTCCTTATCAATCCAGTTATTGTCTAGATAGTTCTTTGAATAAGACCAAGACAAAGGGGAAGGTTCTAGTCTGTCAACATGTACAAAGTTCCACAGAGTCTAAGGTAGCGAAGAGTAAGGTAGTGAAAGAGGTAGGTGGAGTTGGCATGATACTTATTGATGAGACAGATCAAGATGTTGCAATCCCATTTGTGATCCCTTCGGCTATTATCGGAAAGAAAACAGGAGAAATAATTCTATCCTACCTCAAGAACACAAGTAAGCCTAGATCAAGGATTTTGGGAGCAAAGACAGTACTAGGAGCTAAGCCTGCACCCCGTGTAGCAGCATTTTCATCTAAAGGTCCCAATGCTTTAAATCCAGAAATTCTGAAGCCCGATGTTACAGCTCCAGGACTGAATATCCTTGCAGCATGGTCTCCGGCAGCTGGAAACATGTTCAATGTTATGTCAGGAACTTCTATGGCTTGTCCTCATGTAACTGGAATTGCAACCTTAGTCAAAGCTGTCCATCCTTTATGGTCTCCATCTGCTATCAAATCTGCCATCATGACAACAGCTACTATTCTAGATAAGCACCACAGGCCTATCAGTGCAGATCCCGGGCGAAGAAGGGCTAATGCATTTGATTATGGATCAGGGTTTGTGAACCCTGCAAGAGTTCTTGAGCCTGGTCTAATCTATGATTCGGAGCCATCAGATTTTGTTGCATTCCTTTGTTCACTTGGTTATGATCAGCGGTCACTCCGTCTTGTCACTAGAGACAACAGCACATGTGATCGGGCATTCAGAACAGCATCTGACCTCAACTATCCATCTATAACAATGCCCAATCTTAAAGACGACTCTTCAGTAACTCGAACTGTGACTAATGTTGGAAAAGCAAGAAGTATATATAATGTTGTAGTGTCTTCTCCTCCTGGTGTTAATGTCACTGTTATTCCAAGCCGGTTAGTCTTCACGAGAATCGGGCAGAAAATCGAGTTCACAGTGAATTTCAAAATAACAGCTCCCTCAAAGGGCTATGCATTTGGATTTTTCTCATGGACGAACGGAATATCGCAAGTCACCAGTCCTTTAGTTGTTCGGGTTGCACCTTCAAACCATGGGTTGGGGAGATAG | 1857 | 0.4243 | MNIDTGIWPESPSFSDTDMPPVPTRWKGQCQTGEAFNASSCNRKVIGARYYMSGYEAEEDSDTKVSYKSARDSNGHGSHTASIATGRYVANMNYKGLGAGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGAQSPQGDYFNDAISVGSFHAAKRGVMVVASAGNEGIPASATNLAPWILTVAATSTDRDFTSDIVLGNGAKIMGESLSLLGMNASTRIISASVAYAGYFTPYQSSYCLDSSLNKTKTKGKVLVCQHVQSSTESKVAKSKVVKEVGGVGMILIDETDQDVAIPFVIPSAIIGKKTGEIILSYLKNTSKPRSRILGAKTVLGAKPAPRVAAFSSKGPNALNPEILKPDVTAPGLNILAAWSPAAGNMFNVMSGTSMACPHVTGIATLVKAVHPLWSPSAIKSAIMTTATILDKHHRPISADPGRRRANAFDYGSGFVNPARVLEPGLIYDSEPSDFVAFLCSLGYDQRSLRLVTRDNSTCDRAFRTASDLNYPSITMPNLKDDSSVTRTVTNVGKARSIYNVVVSSPPGVNVTVIPSRLVFTRIGQKIEFTVNFKITAPSKGYAFGFFSWTNGISQVTSPLVVRVAPSNHGLGR | 618 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal23g0086 | 618 | Gene3D | - | 203 | 345 | - | - | |
| Lal23g0086 | 618 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1 | 467 | - | - | |
| Lal23g0086 | 618 | SUPERFAMILY | Subtilisin-like | 3 | 471 | IPR036852 | GO:0004252|GO:0006508 | |
| Lal23g0086 | 618 | PANTHER | TRIPEPTIDYL-PEPTIDASE II-RELATED | 3 | 611 | - | - | |
| Lal23g0086 | 618 | Pfam | Subtilase family | 3 | 435 | IPR000209 | GO:0006508|GO:0008236 | |
| Lal23g0086 | 618 | Pfam | PA domain | 237 | 323 | IPR003137 | - | |
| Lal23g0086 | 618 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Lal23g0086 | 618 | Pfam | Fibronectin type-III domain | 513 | 607 | IPR041469 | - | |
| Lal23g0086 | 618 | Gene3D | Peptidase S8/S53 domain | 3 | 480 | IPR036852 | GO:0004252|GO:0006508 | |
| Lal23g0086 | 618 | PRINTS | Subtilisin serine protease family (S8) signature | 72 | 85 | IPR015500 | - | |
| Lal23g0086 | 618 | PRINTS | Subtilisin serine protease family (S8) signature | 396 | 412 | IPR015500 | - | |
| Lal23g0086 | 618 | CDD | Peptidases_S8_3 | 3 | 433 | IPR034197 | - | |
| Lal23g0086 | 618 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 3 | 611 | IPR045051 | - | |
| Lal23g0086 | 618 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 397 | 407 | IPR023828 | - | |
| Lal23g0086 | 618 | CDD | PA_subtilisin_like | 209 | 338 | - | - | |
| Lal23g0086 | 618 | Gene3D | - | 484 | 610 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal23g0086 | Lal-Chr23 | 828613 | 835704 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lal23g0086 | 3 | 605 | Subtilisin-like Serine Gene Family | AT2G05920 | 43.360 | 2.06e-170 | 502 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal23g0086 | - | - | gmx:100808547 | 1036.56 |