Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0079 ATGTATGAAGAAAATGATAATTGCTTTGATCCAAATGCAATGTTGGTACAAGGTACAATAACAGAAAATCACTGCTACTCCCAAATCAATTCAGAGTCAGAACCAAAAATGTCTCACATTTCTGCAACACAAACCAACAACAACAATGTAGGTCTTTCTATGGAAATCATAACATCATACCCATCATCATATTCATGTGAAAATCAACAAGATCATGCTATCATTGCAACAACAACAACAGCAACAACAACTTGTGCTACCAATGCAATGGAATTGGGTTTTGACATGGAAAATAATGATCCATACAATAACTTCACTACCCATTTTGTTGTTGAAGATGTAACTAACAACAATGATCATGGGTCAAGTCAAAATCATTCCTTTGACCAATGTCACCATCAAGATATGAAATTTCCTTCATACCCAAAACCCACACCAGATCTTCTAAACTTCCTTCATTTGAGTCCAACAAAAACTTCTTCATTAGGGAACTCTTCTATTTCCTTTGAAAACATTACACCTCACAATAACAATGGCACTTGGGTTGGTAATAATTGTAACTATAATCATCCTATAGGGGTATCTTATGATCCTTACTTGCATTTGAATCTTCCAACACAACCACCTTTGTTTCAGTCTTTAGTATCTCATGGCTATACTGTGCCAAGAAATGATTTTGTTTTTGGAGATGATATAGAAGGAAGTGGAATTGCTGCATTTCAAGAGTTTGAAAATGGGGTTATAGAGTTAAGTAATCATGATGTTGGAAAAAGGAGAAGAGGAAAAAGCACTAAGCAGTTTACATCTACAACTGAGAGACAAAGGAGAGTGGATTTGGGTGGAAAATTTGATGCATTGAAAGAACTCATTCCAAACCCTTCAAAGCACAATTTGTTGTTACACTCTTTAATTGTTGACCTTGCATTTTCTATTTTTGTTTGTTTTGGTGACACCACTGAAACTAAGAGTGATAGAGCATCTGTGGTGGGAGATGCTATTGATTATATAAAGGAGCTTCTAAGGACAGTGAATGAGCTCAAAATATTGGTTGAGAAGAAAAGGTATGAGAAACAAAGGATGATGAAGAGACACAAGGTTGAAGAAGAAGGTGATGCTTCCATTGAAGGAGACTTGATGAATACAACTAATAACCATTCTTACAATGAAAGCTTAAGGAGTTCTTGGATCCAAAGGAAATCCAAAGATACTGAGATTGATGTGAGGATTATTGATAATGAAGTTACAATAAAGCTTGTTCAAAGGAAGAAAATCAATTGCTTGGTGTATGCTTCTCAAGTTCTTGATGAACTCAACCTTGATCTCCAACATGTTGCTGGTGGCCACATTGGTGATTTCAGCAGCTTTATGTTCAATACCAAGATATGTGAAGGTTCCTCAGTTTATGCTAGTGCCATAGCCAACAAGCTTATTGAGGTCATGGACAAAAATTTGGCAACAGCTTGA 1464 0.3593 MYEENDNCFDPNAMLVQGTITENHCYSQINSESEPKMSHISATQTNNNNVGLSMEIITSYPSSYSCENQQDHAIIATTTTATTTCATNAMELGFDMENNDPYNNFTTHFVVEDVTNNNDHGSSQNHSFDQCHHQDMKFPSYPKPTPDLLNFLHLSPTKTSSLGNSSISFENITPHNNNGTWVGNNCNYNHPIGVSYDPYLHLNLPTQPPLFQSLVSHGYTVPRNDFVFGDDIEGSGIAAFQEFENGVIELSNHDVGKRRRGKSTKQFTSTTERQRRVDLGGKFDALKELIPNPSKHNLLLHSLIVDLAFSIFVCFGDTTETKSDRASVVGDAIDYIKELLRTVNELKILVEKKRYEKQRMMKRHKVEEEGDASIEGDLMNTTNNHSYNESLRSSWIQRKSKDTEIDVRIIDNEVTIKLVQRKKINCLVYASQVLDELNLDLQHVAGGHIGDFSSFMFNTKICEGSSVYASAIANKLIEVMDKNLATA 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0079 487 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 263 339 IPR011598 GO:0046983
Lal23g0079 487 PANTHER TRANSCRIPTION FACTOR BHLH91 1 296 IPR045895 GO:0006355|GO:0048658
Lal23g0079 487 PANTHER TRANSCRIPTION FACTOR BHLH91 321 486 IPR045895 GO:0006355|GO:0048658
Lal23g0079 487 Pfam Helix-loop-helix DNA-binding domain 270 339 IPR011598 GO:0046983
Lal23g0079 487 Coils Coil 336 356 - -
Lal23g0079 487 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 261 361 IPR036638 GO:0046983
Lal23g0079 487 PANTHER TRANSCRIPTION FACTOR BHLH91 1 296 - -
Lal23g0079 487 PANTHER TRANSCRIPTION FACTOR BHLH91 321 486 - -
Lal23g0079 487 Gene3D - 253 359 IPR036638 GO:0046983
Lal23g0079 487 SMART finulus 269 345 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0079 Lal-Chr23 725495 727826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0079 1 482 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 35.465 6.29e-72 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal23g0079 HLH 2.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0079 - - lang:109330962 503.442