Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0068 ATGGACGAGGCTCAAACAACAGCGGCGGCCGCGTCATCGGTGACCGGTTCAAGATGGTGTCCCGGCCACCTTGCATTTGCTCCTTATGTGTCACAGGGTGAAGGTGGAGCCACTAGTAGTGATAACAAGTCCCAAAAGTTGCGTGTGGTTGTGAGAAAATCTTTGGTGGCAAGATTGACCAAGGACATAGTTGAGACATACCAAAATTGCAATCCACAATTTAAATTCTCTGAAGATCTAAATCCAAAAAGATTTTTGACCAGCCCTTCGACTGGAGTGCTTAATGATGCCTATGATAATGTGAACTCAGATCTTATTCTGTCAGTGAATTTTGTCTTGATCCATGTAGAGAAAAATAGAAGATATATTGTCAAAGATGTCCTTGGCCATGGGACATTTGGACAAGTGGCTAAATGCTTGGATTCATATACCAACAGTTTTGTTGCTGTGAAGATCATTAAAAATCAACCTGCATACTATCAACAGGCACTGGTGGAAGTAACTATTTTAACAACGTTGAATAAAAAGTATGATCCTGAGGATAAGCACCACATTGTTCGTATATATGATTATTTTGTATATCAACAACATTTGTGCATATGCTTTGAACTTCTGGACACAAACTTATATGAGCTTATCAAGATGAATCACTTTAGGGGACTATCACTTAGTATTGTTCAGCTGTTCTCTAAGCAGATTTTATGTGGACTGGATCTACTAAAAGAGGCTGGCATTATTCATTGTGATCTGAAGCCTGAAAACATTCTTTTATGTACAAGCACTGTGAAGCCCGCAGAAATCAAGATAATTGACTTTGGGTCAGCATGCATGGAAAATCGTACTGTTTACTCCTATATTCAGAGTCGGTACTACAGATCTCCTGAGGTTCTTCTTGGATATCAATACACAACAGATATTGATATGTGGTCCTTTGGGTGCATAGTGGCTGAATTGTTTCTTGGATTACCATTGTTCCCTGGGGCTTCGGAATTTGATCTTTTGAGGCGGATGATTAAAATACTTGGAGGACAACCGCCTGATTATGTATTGAGGGAGGCCAAAAACACAAGTAAATTCTTTAAGTGTATCGGCAGTCTCCAGAACATTGGCAACAGTGAGAGTTTCGAAAATGGAAGAAGTGTTTATCAAGCATTGACCGAGGAAGAATATGAAGTTAGAGATTTGAAGAAGCCATCAATTGGAAAAGAGTATTTCAATCATATGAACCTTGAAGCCATTGTTACAAATTATCCGTATAGGAAAAACCTACCTAAGGAAGATATTATCAAAGAAAGTCAAATACGATTGGCTCTTATTGATTTTCTGAGAGGGCTTGTTGAACTTGATCCTGCAAAACGCTGGTCACCCTTCCAGGCTTCAAAACACCCTTTTGTAACAGGGGAGCCTTTTACACAGCCTTACAAGCCTCCTCCCAAGACCCCTCGTATGCCAGTAGTTCAAAATATCAAGGTAGATAATCATCCAGGTGGAGGGCATTGGTTTGCTGCTGGTCTATCACCTAATGTTCCAGGCATTAACAGAGTTTCCCAATATAGCAGTCCACACTTTCAGATGGTGCAATATCCACCCGCTAATAGTTATGGTAGTGTAGGAAGCCATGGGAGCTATAATGATGGTTTTGCGCATGGAAGCAGCTATGGAAGTTATGGAGAGAGCAGTAACATGTTTGCTTATTATTCACCTGTTGGTCCATCTGGTATGAACATGCACGGTCAGGGAGGTATGTCAATGCTTGGAAATACTCCTGATGCTCGGAGGAGACTGAAGTATCAACCTGCGAATGGGCTAGGTATAAGCCCATCAGCCGGAAACTTTGCCTCCCTGCCCCTTGGTGCCAGCCCATCTCAATTTACTCCACCGAGTTCTTTTGGTCAGATGTCAGTTGGTTCTCCAGGACACTATGGACCTACATCTCCTGCAAGAGGAGCTTCTCATGGATCGCCTTTAGGGAAGGCAGCTGCAGCTAGCCAGTTCAATAGACGGAAAAATTGGGGATATTCTGGAAGTCCTCAAACTAAAGAAACAGCATTTTCTTCACACTTCCAAGGTCAATCTCATGATGGCTCAAACCATGCCGAGGGAACATCACAAGCTCTTGGCAGTTCGCCATCTTATCTACACTCAAATATTAATCCTGGAAACTGGAAGCACCGAGGAAGTGGAGGGATTATTGCTAATCATAACATGACAGCTACGCTTACTTCTAATGTTAACTTGCAATCAACAGAATTGGCTCGTGACAATGCAGATGCAGCCTTATCGTTGCCTGATCCTGCAGATTGGGATCCTAATTATAGTGATGCTCTTCTCCTGCAAGAGGATGGTTCAGATGAAAGCTCCTTGTCAACTGAGTTCGGAAGAAGTATGAATCTTGGTTCCACTGAACCATGGGTTAGATCCGGAAGGTTCAACCAGAACTCTAGCGCAAGCTCTCCATTAATCATACAGAGACAAAATGCAATAGGTCAAACATTTTCTAATGTAGAGATGAGTAGTCCTTCAATGCATGATGTTCAAGGAACATATAATGTACCTTCTATGTCAAAGCCTTTTCATCATATGCCTCATATGTCACAAAATTCTCCGAGCCGGTTTGGACACCAACCTGTTCAAAGATATTCACATGGTAGACCCCCTCATAGTGGAGATTGGAATCAAATTAAGGTTCAACCTTCTTCCGGATTCAGCGGTCCAGGCCAACGCTCTCCCAGGAATAACTCATTCACCAATACTATGCCATGGGGGAGAAGAATGAATCCTTCTGTGTCAAGTATGCCTCCAACATCTCGTGCAAGAAATGATTATGCAAGTATAAACTAG 2841 0.4213 MDEAQTTAAAASSVTGSRWCPGHLAFAPYVSQGEGGATSSDNKSQKLRVVVRKSLVARLTKDIVETYQNCNPQFKFSEDLNPKRFLTSPSTGVLNDAYDNVNSDLILSVNFVLIHVEKNRRYIVKDVLGHGTFGQVAKCLDSYTNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIYDYFVYQQHLCICFELLDTNLYELIKMNHFRGLSLSIVQLFSKQILCGLDLLKEAGIIHCDLKPENILLCTSTVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTDIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIKILGGQPPDYVLREAKNTSKFFKCIGSLQNIGNSESFENGRSVYQALTEEEYEVRDLKKPSIGKEYFNHMNLEAIVTNYPYRKNLPKEDIIKESQIRLALIDFLRGLVELDPAKRWSPFQASKHPFVTGEPFTQPYKPPPKTPRMPVVQNIKVDNHPGGGHWFAAGLSPNVPGINRVSQYSSPHFQMVQYPPANSYGSVGSHGSYNDGFAHGSSYGSYGESSNMFAYYSPVGPSGMNMHGQGGMSMLGNTPDARRRLKYQPANGLGISPSAGNFASLPLGASPSQFTPPSSFGQMSVGSPGHYGPTSPARGASHGSPLGKAAAASQFNRRKNWGYSGSPQTKETAFSSHFQGQSHDGSNHAEGTSQALGSSPSYLHSNINPGNWKHRGSGGIIANHNMTATLTSNVNLQSTELARDNADAALSLPDPADWDPNYSDALLLQEDGSDESSLSTEFGRSMNLGSTEPWVRSGRFNQNSSASSPLIIQRQNAIGQTFSNVEMSSPSMHDVQGTYNVPSMSKPFHHMPHMSQNSPSRFGHQPVQRYSHGRPPHSGDWNQIKVQPSSGFSGPGQRSPRNNSFTNTMPWGRRMNPSVSSMPPTSRARNDYASIN 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0068 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Lal23g0068 946 Gene3D Phosphorylase Kinase; domain 1 86 202 - -
Lal23g0068 946 MobiDBLite consensus disorder prediction 617 720 - -
Lal23g0068 946 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Lal23g0068 946 SMART serkin_6 122 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0068 946 SUPERFAMILY Protein kinase-like (PK-like) 115 488 IPR011009 -
Lal23g0068 946 PANTHER DUAL SPECIFICITY PROTEIN KINASE 11 881 - -
Lal23g0068 946 MobiDBLite consensus disorder prediction 617 639 - -
Lal23g0068 946 MobiDBLite consensus disorder prediction 667 720 - -
Lal23g0068 946 Gene3D Transferase(Phosphotransferase) domain 1 203 466 - -
Lal23g0068 946 MobiDBLite consensus disorder prediction 863 946 - -
Lal23g0068 946 Pfam Protein kinase domain 123 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0068 946 ProSiteProfiles Protein kinase domain profile. 122 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0068 946 PANTHER BNAC04G29850D PROTEIN 11 881 - -
Lal23g0068 946 MobiDBLite consensus disorder prediction 892 946 - -
Lal23g0068 946 CDD PKc_YAK1 122 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0068 Lal-Chr23 564117 575091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0068 121 351 MAP Kinase Gene Family AT3G18040 33.333 6.17e-31 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Lal23g0068 Pkinase 1.1e-50 CL0016