Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0061 ATGGCTACTGAAAACGGTTCCAAACAAGATCCCCAAACCCTCATCCGTTCCTGCGCCTCTTTTCTCGCCTGCCGTGATTTTAACACGTGTCGTCAGCTCGCTCACTGTATCCCCAGATCAGACCCTAACATCATCGTTCAAGTCGACCAAATCTTAACAATTGTTCACGTCCTCTCCGCGGCTCAACGCCGAGTCAGCGACGCTAATCTCGATTGGTATTCTATTCTCCGGCTTCGCCGCGAGGATTCAGCTAATCGTGACTTAGTTCGCCAGCAATTTAAGAATCTCATGCGTCTCCTTAACCCTAATAATAACAAGTTTCCCTTCGCGGACGATGCACTGATGCGTGTCCGTGAGGGTTGGTTTGTGATATCTGATCCAGTGAGGAGAGCCTCTTTTGACCGTGAGATTGACGAGGATAAGAAGAAGGGAACCTCGTTTTGGACCATGTGTCCTTATTGTTGGTATCTGCACGAATATGAAAGGAAATATGAGGATTGTACTTTTCGATGTGGAAACTGTCAGAAGACGTTTCACGGTGTGGAGGTGAAGCCGCCGACGAAGGATATGATGGTGGAGGGGAAGGAGCAGTATTATTGTTATCAAGTTAGTTTGCCTTGTAGGTATCCTGTGGATGAGAACATTATTAGGGATTCGAATGGAGGAATAGGTTTACAGAGCAATGGGAAAAAGAGGATGAGAATGAAAACTATGGCTAGGAGGGTTAGAATGAAAGGGTTTATTGAAGAAAATAGTGATGCTGATACGGATGTAGAACAAGAAGGAAAAGAGGATTGCATTGTTTGTATCGTGTTGTTTTGCAATGCCGCTTCAACTAACTATAATCTGTCATGCAAGAATATCACTGCAAATGTTGTTGATTCTCTTCAATCCAATGCTCTTTGGCAGGATTTCTTTAACATGCAACTCCGGTTTTGTTTTCTCAATAACAAGATCGTTAATGAAGATTGGTTAAGGGCGGTGTTGGTTCATGTGTGGGTTTATAGAGTTGGGGCAATGATGCTGCACTTTCAACAGCTGCATGGCGGTTCAATCACGATGAAGTTTGGGAAGACACCATGGATGGAGGAGGAGCCCTTTAAGCCGCCTCTCTTGTCGATGCGGTAG 1128 0.4495 MATENGSKQDPQTLIRSCASFLACRDFNTCRQLAHCIPRSDPNIIVQVDQILTIVHVLSAAQRRVSDANLDWYSILRLRREDSANRDLVRQQFKNLMRLLNPNNNKFPFADDALMRVREGWFVISDPVRRASFDREIDEDKKKGTSFWTMCPYCWYLHEYERKYEDCTFRCGNCQKTFHGVEVKPPTKDMMVEGKEQYYCYQVSLPCRYPVDENIIRDSNGGIGLQSNGKKRMRMKTMARRVRMKGFIEENSDADTDVEQEGKEDCIVCIVLFCNAASTNYNLSCKNITANVVDSLQSNALWQDFFNMQLRFCFLNNKIVNEDWLRAVLVHVWVYRVGAMMLHFQQLHGGSITMKFGKTPWMEEEPFKPPLLSMR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0061 375 Gene3D DnaJ domain 55 148 IPR036869 -
Lal23g0061 375 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 5 257 - -
Lal23g0061 375 ProSiteProfiles dnaJ domain profile. 71 137 IPR001623 -
Lal23g0061 375 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 257 - -
Lal23g0061 375 Pfam DnaJ domain 71 134 IPR001623 -
Lal23g0061 375 SUPERFAMILY Chaperone J-domain 63 137 IPR036869 -
Lal23g0061 375 SMART dnaj_3 70 129 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0061 Lal-Chr23 509040 511759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0061 1 200 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.032 4.02e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0061 - - gmx:102664100 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1078 23 12450266 12452761 Lal23g0061 23 509040 511759 PCT
Lal23g0061 23 509040 511759 Lal23g1078 23 12450266 12452761 PCT