Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0046 ATGGCTCACAAGAAGGAGAAAAATGATTCCGAAAATGATACGAAAAGTGATTCCATAAAAGATACGAAAAGTGATTCCAAAAATGATATAGACAAGTTTTTACCATCCAAAGCAACCTCTGATATTCCAAAGAAGCATTTGTTTAACATTAACAATGATTCATTTCCAACACCAAAACCTATTCTTCATCATCATCATTCACTTTCTCCAAAATCTGCACCGTTGCTTTCTCCACCACCACCACCCTCATTGCCACCATCTTCTCCACCTTCTTCACCACCATTACCTTCTTCGCCTCCACCACCATTACCTGCCTCTCCACCACCACCACAACTGTCACCACCACCACCACAACTATCACCACCACCACCACAACTACCACCACCACCACCTCCACCAAAGTTCCAAGCTCCACCTCCACCTTCATCATCTCCTCCTCCTTCACCACCCTCACGTAATGGTGCACCTTCCAATGATTCTTCAACGTCCAAATCACCCATCTCTCCTCTTCCAATACCTTCAGGGTCAAACAACCATACCATGCACGGTGGTGGTGGGTCCCATGCAAAATCAGGTGGTGGTGGTGGTGGTGGTGGTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATGATTCCTCATCATCATCATCTACACCAAGTGATGATAATAGTCCAGGAAAATATGTTGGTTATACATTGGCTGGGGTTTTCGTTATTGGTGTAGTTGCTTTAGCACTATTTTACACTTACAAGAGATCAAAGAGGAAAACAACATCAAAAGGAGATTCCTTGGTTGCAACCTATGATATTGACATTCATGCAAAATCAGGTACAGATGTGCAATACAAAGCACAACAGCCACAATCTGTGCATGGAAACATCTATGGAAATGGGAGTATGAAACATATAGGAGGAGGTTCTTTAGACACAGCACAACCCAAAAGTGCTCAAATAGCTTTTACCTATGACATGGTTATGGAAATGACCAATGCATTTTGTAGTGAAAATGTTATAGGGGAAGGTGGATTTGGGTGTGTTTACAAGGGTTGGTTACATGATGGAAGAGCAGTTGCAGTTAAGCAGCTTAAGGCTGGAAGTGGACAAGGAGAGAGAGAATTTCAAGCTGAAGTTGAGATTATAAGTCGTGTTCATCATAAGCATTTGGTTTCATTAGTTGGTTATTGCATATTTGAGCAGCAAAGAATGCTTATCTATGAGTTTCTTCCTAATGGAACACTCCATCATCACTTGCATGGAAGTGAAATGCCAGTTCTGGATTGGTCCAAGAGGCTGAAGATTGCAATTGGAGCTGCAAAGGGATTGGCATATCTACATGAGGACTGCAGCCAAAAGATTATTCACAGAGATATTAAGTCAGCAAATATACTATTGGATGATGCTTTTGAGGCACAGGTTGCAGACTTTGGACTTGCAAGACTAACAGATACTGGCAATACCCATGTATCAACTAGGGTTATGGGGACCTTTGGATACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACTGATAGATCAGATGTTTTCTCATTCGGGGTTGTCCTCCTTGAGCTTATAACTGGAAGGAAACCAGTTGATCAAACTCAGCCTTTGGGAGATGAGAGTTTGGTTGAGTGGGCTAGACCCCTTCTTATTCGTGCCATTGAGACACGCGACATTAGTGAATTAACAGATCCAAGGCTTGAAAAACACTATGTGGAGAGTGAAATGTTCAGAATGATTGAGGCAGCTGCAGCATGTGTTCGCCACTCAACTCCTAAACGGCCACGAATGGTTCAGGTGGTAAGGGCCTTAGATAGTGGAGATGATATATCTGATCTAACTAATGGGGTAAAATATGGCCAGAGCACTGTTTATGATTCTAGGCAGTATGATAAAGATATTATGCTATTCAGGAGGATGGCCAATGACAGCTTTGTTGATACTAATTCTGATATGTACTGTAGAGAATACGGTTATTCGAGAGATATGTCTGGAATCCAACCTGCTTGGTTACGGAGTGGTTCTAGCGGCGAGTCAGAATCGAACGCTTTCAACAGTCAACGGAGTAGCAGTTGA 2076 0.4234 MAHKKEKNDSENDTKSDSIKDTKSDSKNDIDKFLPSKATSDIPKKHLFNINNDSFPTPKPILHHHHSLSPKSAPLLSPPPPPSLPPSSPPSSPPLPSSPPPPLPASPPPPQLSPPPPQLSPPPPQLPPPPPPPKFQAPPPPSSSPPPSPPSRNGAPSNDSSTSKSPISPLPIPSGSNNHTMHGGGGSHAKSGGGGGGGGSSSSSSSSSNDSSSSSSTPSDDNSPGKYVGYTLAGVFVIGVVALALFYTYKRSKRKTTSKGDSLVATYDIDIHAKSGTDVQYKAQQPQSVHGNIYGNGSMKHIGGGSLDTAQPKSAQIAFTYDMVMEMTNAFCSENVIGEGGFGCVYKGWLHDGRAVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCIFEQQRMLIYEFLPNGTLHHHLHGSEMPVLDWSKRLKIAIGAAKGLAYLHEDCSQKIIHRDIKSANILLDDAFEAQVADFGLARLTDTGNTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDQTQPLGDESLVEWARPLLIRAIETRDISELTDPRLEKHYVESEMFRMIEAAAACVRHSTPKRPRMVQVVRALDSGDDISDLTNGVKYGQSTVYDSRQYDKDIMLFRRMANDSFVDTNSDMYCREYGYSRDMSGIQPAWLRSGSSGESESNAFNSQRSSS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0046 691 CDD STKc_IRAK 337 605 - -
Lal23g0046 691 SUPERFAMILY Protein kinase-like (PK-like) 313 604 IPR011009 -
Lal23g0046 691 ProSiteProfiles Protein kinase domain profile. 331 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0046 691 MobiDBLite consensus disorder prediction 73 153 - -
Lal23g0046 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Lal23g0046 691 MobiDBLite consensus disorder prediction 670 691 - -
Lal23g0046 691 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Lal23g0046 691 MobiDBLite consensus disorder prediction 154 184 - -
Lal23g0046 691 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 66 672 - -
Lal23g0046 691 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 66 672 - -
Lal23g0046 691 MobiDBLite consensus disorder prediction 1 224 - -
Lal23g0046 691 SMART serkin_6 331 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0046 691 Pfam Protein tyrosine and serine/threonine kinase 334 603 IPR001245 GO:0004672|GO:0006468
Lal23g0046 691 Gene3D Transferase(Phosphotransferase) domain 1 407 619 - -
Lal23g0046 691 MobiDBLite consensus disorder prediction 1 34 - -
Lal23g0046 691 MobiDBLite consensus disorder prediction 196 224 - -
Lal23g0046 691 Gene3D Phosphorylase Kinase; domain 1 303 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0046 Lal-Chr23 344870 349975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0046 212 657 Trihelix Transcription Factor Family AT1G70460 61.720 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lal23g0046 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0046 - - lang:109330554 912.909