Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0043 ATGGCTATGGCTTCTTCACTCAGATTCTCAAGGCTTCTCTCTCGCTCTTTATCTTCTGCTTCTTCCTCTTTCTTTTCTCCAGGTGGAAGTGCTATCCTAGGTGCAAGGGTTAGTAAGTACAGCACTGATGCTGCCATTGAAGAACCAATTAAACCATCAGTTCAAGTAGAGCACACCCAGCTCTTAATTAATGGAAAATTTGTTGATGCTGCTTCTGAGAAAAAAAAATGGGGAGATTTGAAGTTTTTGTGGTATCTTATTGTTGGGATTCTTCTGGCATTAGGTAAAACTTTTCCAACATTGGACCCTAGGACAGGGGAAGTGATTGCTCATGTTGCTGAAGGTCACTCTGAAGATATTGATCGAGCAGTTGCGGCTGCGCGAAAAGCATTCGATCAAGGGCCATGGCCTAAGATGACAGCCTATGAAAGGCAAAGGATATTATTGCGTGCTGCTGATCTGATTGAAAAGCATAATGATGAGATTGCAGCACTTGAGACTTGGGATAATGGGAAGCCATATGAACAATCTGCTCAGATTGAAATTCCAATGCTTGTTCGCCTAGTTCGATACTATGCGGGCTGGGCAGATAAGATTCATGGTCTTACAGTTCCAGCTGACGGGCCATACCATGTGCAAACATTGCACGAACCCATTGGTGTTGCTGGTCAGATCATTCCATGGAACTTCCCTCTTGTCATGTTTGCTTGGAAGGTTGGACCAGCATTAGCCTGTGGTAACACTATAGTTCTGAAAACAGCCGAGCAGACACCATTATCTGCTTTATATGTCGCACGGTTATTTCATGAGGCGGAGGAGCCTCAAAATCACGTTTACCAAAATCTACTACTTGTAGCTTTTGGCCGTAATTCACATTTAAGGTGCCTCAGGCACCGTGAAAACAAACATGCATTTCATGTTGCTGGACTCCCTCCTGGTGTTTTAAATATTGTGTCGGGCTTTGGTCCAACTGCTGGTGCTGCTCTTGCTAGTCACATGGATGTGGATAAGCTTGCTTTTACTGGTTCAACTGAGACTGGAAAGGTTGTCCTTCAATTGGCAACAAAAAGCAATCTTAAGCCTGTAACCTTGGAGCTTGGTGGGAAGTCTCCCTTTATTGTATGTGAAGATGCCGATGTAGATCAGGCTGTTGAGCTAGCACACTTTGCCTTATTCTTTAACCAGGGACAATGTTGCTGTGCTGGGTCTCGAACATTTGTACATGAAAGTATACATGAGGAGTTTGTTGCGAAAGCAAAGGCTCGTGCTTTGAAACGTGTTGTTGGCGATCCATTCAAGAGTGGAATTGAGCAAGGTCCTCAGATTGATTCAGACCAATTTGAGAAAATACTGAAGTATATCAGATCTGGTGTTGAAAGTGGAGCTACGCTTGAAACCGGAGGCGATAGGCTTGGCAACAAGGGTTTCTATGTTCAGCCTACTGTATTCTCAAATGTTCAGGATGGCATGCTGATTGCAAAGGAGGAGATATTTGGCCCAGTGCAATCTATATTTAAGTTCAAGGACCTTGGTGAGGTAATTCAAAGAGCAAACAACACACAATATGGTCTAGCAGCTGGGGTATTCACAAAGAACTTAGACACTGCTAATACTTTGACAAGAGCATTGAGAGTTGGAACAGTATGGGTTAACTGCTTTGATACATTTGATGCTGCAATTCCTTTTGGTGGGTACAAGATGAGTGGACAAGGAAGAGAAAAAGGAGAGTATAGTCTTAAGAACTACTTGCAAGTGAAAGCTGTTGTTACTCCCTTGAAGAACCCTGCATGGCTTTGA 1797 0.4341 MAMASSLRFSRLLSRSLSSASSSFFSPGGSAILGARVSKYSTDAAIEEPIKPSVQVEHTQLLINGKFVDAASEKKKWGDLKFLWYLIVGILLALGKTFPTLDPRTGEVIAHVAEGHSEDIDRAVAAARKAFDQGPWPKMTAYERQRILLRAADLIEKHNDEIAALETWDNGKPYEQSAQIEIPMLVRLVRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQTPLSALYVARLFHEAEEPQNHVYQNLLLVAFGRNSHLRCLRHRENKHAFHVAGLPPGVLNIVSGFGPTAGAALASHMDVDKLAFTGSTETGKVVLQLATKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHESIHEEFVAKAKARALKRVVGDPFKSGIEQGPQIDSDQFEKILKYIRSGVESGATLETGGDRLGNKGFYVQPTVFSNVQDGMLIAKEEIFGPVQSIFKFKDLGEVIQRANNTQYGLAAGVFTKNLDTANTLTRALRVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0043 598 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 368 594 IPR016163 GO:0016620
Lal23g0043 598 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 28 74 - -
Lal23g0043 598 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 304 598 - -
Lal23g0043 598 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 92 276 - -
Lal23g0043 598 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 28 74 - -
Lal23g0043 598 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 304 598 - -
Lal23g0043 598 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 92 276 - -
Lal23g0043 598 SUPERFAMILY ALDH-like 95 592 IPR016161 GO:0016491
Lal23g0043 598 CDD ALDH_F2BC 56 590 - -
Lal23g0043 598 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 44 367 IPR016162 GO:0016491
Lal23g0043 598 Pfam Aldehyde dehydrogenase family 96 276 IPR015590 GO:0016491
Lal23g0043 598 Pfam Aldehyde dehydrogenase family 303 588 IPR015590 GO:0016491
Lal23g0043 598 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 392 403 IPR016160 GO:0016491
Lal23g0043 598 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 364 371 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0043 Lal-Chr23 314548 318975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0043 8 598 Aldehyde Dehydrogenase Gene Family AT3G48000 69.983 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0043 K00128 - gmx:100811891 934.865